RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 OR8B2Q96RD0 313 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 PFDN5Q99471 154 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 MRPL32Q9BYC8 188 aaKnown RBP5.4□□□□□ -1.54
USP28-206ENST00000538224 NDUFA4L2Q9NRX3 87 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 DOK5Q9P104 306 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 SLC45A2Q9UMX9 530 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 RAXQ9Y2V3 346 aa5.4□□□□□ -1.54
USP28-206ENST00000538224 ARFGEF3Q5TH69 2177 aa5.4□□□□□ -1.55
USP28-206ENST00000538224 BOD1L1Q8NFC6 3051 aa5.4□□□□□ -1.55
USP28-206ENST00000538224 PTPRQQ9UMZ3 2332 aa5.4□□□□□ -1.55
USP28-206ENST00000538224 SPENQ96T58 3664 aaKnown RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 MGAQ8IWI9 3026 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 TRAV20A0A0B4J274 112 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 CORTO00230 105 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 HMGB3O15347 200 aaKnown RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 ACTL6BO94805 426 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 YIF1AO95070 293 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 FABP1P07148 127 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 ARL14EPLP0DKL9 152 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 RNASE2P10153 161 aaKnown RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 AREGP15514 252 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 GCHFRP30047 84 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 SRP14P37108 136 aaKnown RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 COMPP49747 757 aaPredicted RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 SELENOTP62341 195 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 RPL23P62829 140 aaKnown RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 PRR20EP86478 221 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 PRR20CP86479 221 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 PRR20DP86480 221 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 PRR20BP86481 221 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 PRR20AP86496 221 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 CD69Q07108 199 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 KIAA0141Q14154 515 aaPredicted RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 ZNF674Q2M3X9 581 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 CST9LP1Q5W188 147 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 MIC13Q5XKP0 118 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 LYPD2Q6UXB3 125 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 PQLC2Q6ZP29 291 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 SLC16A13Q7RTY0 426 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 MMD2Q8IY49 270 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 OR1L4Q8NGR5 311 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 TMEM190Q8WZ59 177 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 FAM210BQ96KR6 192 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 RNF5Q99942 180 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 CLEC7AQ9BXN2 247 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 TMPRSS5Q9H3S3 457 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 CBLN4Q9NTU7 201 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 TECRQ9NZ01 308 aaKnown RBP5.39□□□□□ -1.55
USP28-206ENST00000538224 FUT9Q9Y231 359 aa5.39□□□□□ -1.55
USP28-206ENST00000538224 PIEZO2Q9H5I5 2752 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 ELOA3CA0A087WX78 387 aaPredicted RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 IGHV2-26A0A0B4J1V2 119 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 SRRM4A7MD48 611 aaKnown RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 C9JCJ5 164 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 FCN3O75636 299 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 IGLV1-47P01700 117 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 IGHV2-5P01817 119 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 LIPFP07098 398 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 OR5G3P0C626 314 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 IGFBP2P18065 325 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 RPL35P42766 123 aaKnown RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 GALR1P47211 349 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 RPL19P84098 196 aaKnown RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 ADORA2A-AS1P86434 159 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 PAX2Q02962 417 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 UTF1Q5T230 341 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 ZNF114Q8NC26 417 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 OR4P4Q8NGL7 312 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 GATAD1Q8WUU5 269 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 SSMEM1Q8WWF3 244 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 C11orf52Q96A22 123 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 SRSF8Q9BRL6 282 aaKnown RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 OR51M1Q9H341 326 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 ZNF430Q9H8G1 570 aaPredicted RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 SRD5A3Q9H8P0 318 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 PATZ1Q9HBE1 687 aaKnown RBP5.38□□□□□ -1.55
USP28-206ENST00000538224 LY96Q9Y6Y9 160 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 ASPMQ8IZT6 3477 aa5.38□□□□□ -1.55
USP28-206ENST00000538224 TLN1Q9Y490 2541 aaKnown RBP5.37□□□□□ -1.55
USP28-206ENST00000538224 TRAV9-1A0A075B6T8 112 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 TGIF2-C20orf24A0A0A6YYL0 155 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 PPIAL4CA0A0B4J2A2 164 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 MDFIC2A0A1B0GVS7 189 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 PPP5D1E7EU14 171 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 M0R1W7 72 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 IGLV2-23P01705 113 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 LINC00869P0C866 280 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 PPIAL4GP0DN37 164 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 CEACAM3P40198 252 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 RPL27AP46776 148 aaKnown RBP5.37□□□□□ -1.55
USP28-206ENST00000538224 REG1BP48304 166 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 FAM3BP58499 235 aaPredicted RBP5.37□□□□□ -1.55
USP28-206ENST00000538224 LCN2P80188 198 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 FABP9Q0Z7S8 132 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 GAMTQ14353 236 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 GCSAMLQ5JQS6 135 aa5.37□□□□□ -1.55
USP28-206ENST00000538224 FAM78BQ5VT40 261 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms