RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
LRRK1-211ENST00000538064 COMMD5Q9GZQ3 224 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 C5orf66Q9H5L9 145 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 PTTG2Q9NZH5 202 aa11.3□□□□□ -0.6
LRRK1-211ENST00000538064 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 NAP1L6A6NFF2 107 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 C2orf70A6NJV1 201 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 CENPXA8MT69 81 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 LGALS9O00182 355 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 REG1AP05451 166 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 G6PCP35575 357 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 ARL3P36405 182 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 THOC7Q6I9Y2 204 aaKnown RBP11.29□□□□□ -0.6
LRRK1-211ENST00000538064 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 SLC25A21Q9BQT8 299 aaPredicted RBP11.29□□□□□ -0.6
LRRK1-211ENST00000538064 RTBDNQ9BSG5 229 aaPredicted RBP11.29□□□□□ -0.6
LRRK1-211ENST00000538064 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 FKBP11Q9NYL4 201 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
LRRK1-211ENST00000538064 A8MWP6 167 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 IGHV3-23P01764 117 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 HLA-AP01891 365 aaKnown RBP11.28□□□□□ -0.6
LRRK1-211ENST00000538064 DEFA4P12838 97 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 DHODHQ02127 395 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
LRRK1-211ENST00000538064 CLEC19AQ6UXS0 136 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 GPHB5Q86YW7 130 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 CITED4Q96RK1 184 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 SDHCQ99643 169 aaPredicted RBP11.28□□□□□ -0.6
LRRK1-211ENST00000538064 C7orf50Q9BRJ6 194 aaKnown RBP11.28□□□□□ -0.6
LRRK1-211ENST00000538064 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
LRRK1-211ENST00000538064 ZC4H2Q9NQZ6 224 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 RYR2Q92736 4967 aa11.28□□□□□ -0.6
LRRK1-211ENST00000538064 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 MFSD2BA6NFX1 497 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 OR2C1O95371 312 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 IL7P13232 177 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 UCP1P25874 307 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 SP6Q3SY56 376 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 CCDC32Q9BV29 185 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.61
LRRK1-211ENST00000538064 S4R3C0 116 aa11.27□□□□□ -0.61
LRRK1-211ENST00000538064 SACSQ9NZJ4 4579 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 IGKV1-39P01597 117 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 IGKV1D-39P04432 117 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 OR5AC1P0C628 307 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 ANXA3P12429 323 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 FOLR2P14207 255 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 EDN2P20800 178 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 AKR1C2P52895 323 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 CD81P60033 236 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 RBMS2Q15434 407 aaKnown RBP11.26□□□□□ -0.61
LRRK1-211ENST00000538064 HAGHQ16775 308 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 DEFB114Q30KQ6 69 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 HSD17B13Q7Z5P4 300 aaPredicted RBP11.26□□□□□ -0.61
LRRK1-211ENST00000538064 TMED4Q7Z7H5 227 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 OR1L8Q8NGR8 309 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 RNASE11Q8TAA1 199 aaKnown RBP11.26□□□□□ -0.61
LRRK1-211ENST00000538064 RRNAD1Q96FB5 475 aaKnown RBP11.26□□□□□ -0.61
LRRK1-211ENST00000538064 SEC22AQ96IW7 307 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 TUBA4BQ9H853 241 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 CSMD3Q7Z407 3707 aa11.26□□□□□ -0.61
LRRK1-211ENST00000538064 LINC00854A0A1B0GVQ3 168 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 AKR1C4P17516 323 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 OR5B3Q8NH48 314 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 ZNF502Q8TBZ5 544 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 LYSTQ99698 3801 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 NEURL2Q9BR09 285 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 WDR12Q9GZL7 423 aaKnown RBP11.25□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM222Q9H0R3 208 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 PLEKHA3Q9HB20 300 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 THYN1Q9P016 225 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 NSG2Q9Y328 171 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 OR51B2Q9Y5P1 312 aa11.25□□□□□ -0.61
LRRK1-211ENST00000538064 TEX50A0A1B0GTY4 177 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 CYB5BO43169 146 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 CDS2O95674 445 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 TRAPPC2P0DI81 140 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 TRAPPC2BP0DI82 140 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 CBLN1P23435 193 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 GPR183P32249 361 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 ZNF846Q147U1 533 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms