RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FOXL2NBQ6ZUU3 175 aa8.85□□□□□ -0.99
RTN3-208ENST00000537981 FGF23Q9GZV9 251 aaPredicted RBP8.85□□□□□ -0.99
RTN3-208ENST00000537981 MTCH1Q9NZJ7 389 aa8.85□□□□□ -0.99
RTN3-208ENST00000537981 KCNS2Q9ULS6 477 aa8.85□□□□□ -0.99
RTN3-208ENST00000537981 SPCS1Q9Y6A9 102 aa8.85□□□□□ -0.99
RTN3-208ENST00000537981 PRRC2CQ9Y520 2896 aaKnown RBP8.84□□□□□ -0.99
RTN3-208ENST00000537981 IGHV1-24A0A0C4DH33 117 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 TRAPPC2LH3BP13 241 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 K7EQM0 130 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 MT-ND6P03923 174 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 ADH4P08319 380 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 C5orf64Q2M2E5 130 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 SLC37A2Q8TED4 501 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 SSMEM1Q8WWF3 244 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 NABP1Q96AH0 204 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 OR2W1Q9Y3N9 320 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 CUL9Q8IWT3 2517 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 FAM90A18PA6NE21 464 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 FAM90A16PA6NEW6 464 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 FAM90A9PA6NNJ1 464 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 FAM90A5PA8MXJ8 464 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 VWC2LB2RUY7 222 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 TMEM150CB9EJG8 249 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 HLA-DQA1P01909 254 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 FAM90A15PP0C7V4 464 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 FAM90A14PP0C7W9 464 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 CAMPP49913 170 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 ATP5IP56385 69 aaPredicted RBP8.84□□□□□ -0.99
RTN3-208ENST00000537981 LSM10Q969L4 123 aaKnown RBP8.84□□□□□ -0.99
RTN3-208ENST00000537981 TRIB1Q96RU8 372 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 ASCL2Q99929 193 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 GEMIN7Q9H840 131 aaKnown RBP8.84□□□□□ -0.99
RTN3-208ENST00000537981 ALKBH4Q9NXW9 302 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 JKAMPQ9P055 326 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 COPS7AQ9UBW8 275 aa8.84□□□□□ -0.99
RTN3-208ENST00000537981 NCOR1O75376 2440 aa8.84□□□□□ -1
RTN3-208ENST00000537981 DOCK7Q96N67 2140 aa8.83□□□□□ -1
RTN3-208ENST00000537981 A0A1W2PQD3 144 aa8.83□□□□□ -1
RTN3-208ENST00000537981 HELTA6NFD8 242 aa8.83□□□□□ -1
RTN3-208ENST00000537981 CDIPTO14735 213 aa8.83□□□□□ -1
RTN3-208ENST00000537981 HIST1H1EP10412 219 aaKnown RBP8.83□□□□□ -1
RTN3-208ENST00000537981 CD40P25942 277 aa8.83□□□□□ -1
RTN3-208ENST00000537981 ZNF776Q68DI1 518 aaPredicted RBP8.83□□□□□ -1
RTN3-208ENST00000537981 RAB1CQ92928 201 aa8.83□□□□□ -1
RTN3-208ENST00000537981 LINC00479Q96M42 142 aa8.83□□□□□ -1
RTN3-208ENST00000537981 ZNF391Q9UJN7 358 aa8.83□□□□□ -1
RTN3-208ENST00000537981 SPENQ96T58 3664 aaKnown RBP8.83□□□□□ -1
RTN3-208ENST00000537981 A0A1W2PQF6 199 aa8.83□□□□□ -1
RTN3-208ENST00000537981 NPIPB13A6NJU9 1138 aa8.83□□□□□ -1
RTN3-208ENST00000537981 NPIPB4C9JG80 1138 aa8.83□□□□□ -1
RTN3-208ENST00000537981 NCR2O95944 276 aa8.83□□□□□ -1
RTN3-208ENST00000537981 IGLV2-8P01709 118 aa8.83□□□□□ -1
RTN3-208ENST00000537981 SCGB1A1P11684 91 aa8.83□□□□□ -1
RTN3-208ENST00000537981 RPS21P63220 83 aaKnown RBP8.83□□□□□ -1
RTN3-208ENST00000537981 HLA-DQA1Q5Y7H0 255 aa8.83□□□□□ -1
RTN3-208ENST00000537981 AP1S3Q96PC3 154 aa8.83□□□□□ -1
RTN3-208ENST00000537981 RABAC1Q9UI14 185 aa8.83□□□□□ -1
RTN3-208ENST00000537981 SDK1Q7Z5N4 2213 aa8.83□□□□□ -1
RTN3-208ENST00000537981 FREM1Q5H8C1 2179 aa8.82□□□□□ -1
RTN3-208ENST00000537981 DSPP15924 2871 aaKnown RBP8.82□□□□□ -1
RTN3-208ENST00000537981 OR10J4P0C629 311 aa8.82□□□□□ -1
RTN3-208ENST00000537981 FCGR2BP31994 310 aaPredicted RBP8.82□□□□□ -1
RTN3-208ENST00000537981 GNG4P50150 75 aa8.82□□□□□ -1
RTN3-208ENST00000537981 MFAP2P55001 183 aa8.82□□□□□ -1
RTN3-208ENST00000537981 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
RTN3-208ENST00000537981 TPRX1Q8N7U7 411 aa8.82□□□□□ -1
RTN3-208ENST00000537981 GJC3Q8NFK1 279 aa8.82□□□□□ -1
RTN3-208ENST00000537981 CCDC140Q96MF4 163 aa8.82□□□□□ -1
RTN3-208ENST00000537981 LSM4Q9Y4Z0 139 aaKnown RBP8.82□□□□□ -1
RTN3-208ENST00000537981 A0A1W2PPM0 123 aa8.82□□□□□ -1
RTN3-208ENST00000537981 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
RTN3-208ENST00000537981 C1orf61Q13536 156 aa8.82□□□□□ -1
RTN3-208ENST00000537981 WFDC2Q14508 124 aa8.82□□□□□ -1
RTN3-208ENST00000537981 PSG3Q16557 428 aa8.82□□□□□ -1
RTN3-208ENST00000537981 ADAMTSL5Q6ZMM2 481 aa8.82□□□□□ -1
RTN3-208ENST00000537981 MRPL21Q7Z2W9 205 aaKnown RBP8.82□□□□□ -1
RTN3-208ENST00000537981 HINT2Q9BX68 163 aa8.82□□□□□ -1
RTN3-208ENST00000537981 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
RTN3-208ENST00000537981 LRP4O75096 1905 aa8.82□□□□□ -1
RTN3-208ENST00000537981 SVILO95425 2214 aa8.81□□□□□ -1
RTN3-208ENST00000537981 ASPMQ8IZT6 3477 aa8.81□□□□□ -1
RTN3-208ENST00000537981 SMIM27A0A1W2PRY6 76 aa8.81□□□□□ -1
RTN3-208ENST00000537981 PSMB11A5LHX3 300 aa8.81□□□□□ -1
RTN3-208ENST00000537981 BRI3O95415 125 aa8.81□□□□□ -1
RTN3-208ENST00000537981 GCHFRP30047 84 aa8.81□□□□□ -1
RTN3-208ENST00000537981 LTBRP36941 435 aa8.81□□□□□ -1
RTN3-208ENST00000537981 ARL4DP49703 201 aa8.81□□□□□ -1
RTN3-208ENST00000537981 RPL30P62888 115 aaKnown RBP8.81□□□□□ -1
RTN3-208ENST00000537981 CD300EQ496F6 205 aaPredicted RBP8.81□□□□□ -1
RTN3-208ENST00000537981 Q6ZSR3 168 aa8.81□□□□□ -1
RTN3-208ENST00000537981 TMEM251Q8N6I4 163 aa8.81□□□□□ -1
RTN3-208ENST00000537981 MGST2Q99735 147 aa8.81□□□□□ -1
RTN3-208ENST00000537981 FSCN3Q9NQT6 498 aa8.81□□□□□ -1
RTN3-208ENST00000537981 ZNF355PQ9NSJ1 428 aa8.81□□□□□ -1
RTN3-208ENST00000537981 TRGV10A0A0A0MS01 117 aa8.81□□□□□ -1
RTN3-208ENST00000537981 C15orf62A8K5M9 175 aa8.81□□□□□ -1
RTN3-208ENST00000537981 ISLRO14498 428 aa8.81□□□□□ -1
RTN3-208ENST00000537981 ZIC3O60481 467 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms