RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CDS2O95674 445 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 LY86O95711 162 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 ARL3P36405 182 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 HSPE1P61604 102 aaKnown RBP13.19□□□□□ -0.3
GPN3-202ENST00000537466 PRCDQ00LT1 54 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 SPINK9Q5DT21 86 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 CXorf58Q96LI9 332 aa13.19□□□□□ -0.3
GPN3-202ENST00000537466 TRBV7-1A0A0A6YYK4 115 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
GPN3-202ENST00000537466 ATG12O94817 140 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 OR2C1O95371 312 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 IGLV1-51P01701 117 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 CSN3P07498 182 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 FAUP35544 74 aaKnown RBP13.18□□□□□ -0.3
GPN3-202ENST00000537466 AP3S2P59780 193 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 TATDN3Q17R31 274 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 SELENOHQ8IZQ5 122 aaKnown RBP13.18□□□□□ -0.3
GPN3-202ENST00000537466 ZNF502Q8TBZ5 544 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 ZC4H2Q9NQZ6 224 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 PRR13Q9NZ81 148 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 THYN1Q9P016 225 aa13.18□□□□□ -0.3
GPN3-202ENST00000537466 LSM4Q9Y4Z0 139 aaKnown RBP13.18□□□□□ -0.3
GPN3-202ENST00000537466 IGHV3-21A0A0B4J1V1 117 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 ST8SIA3O43173 380 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 CLEC3BP05452 202 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 DHODHQ02127 395 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 BAK1Q16611 211 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 Q6ZRM9 215 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
GPN3-202ENST00000537466 CYB5BO43169 146 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 AKR1C4P17516 323 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 EDN2P20800 178 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 GPR183P32249 361 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
GPN3-202ENST00000537466 TMEM268Q5VZI3 342 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 SGPP2Q8IWX5 399 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 RNASE11Q8TAA1 199 aaKnown RBP13.16□□□□□ -0.3
GPN3-202ENST00000537466 VN1R17PQ8TDU5 208 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 RBPMSQ93062 196 aaKnown RBP13.16□□□□□ -0.3
GPN3-202ENST00000537466 RRNAD1Q96FB5 475 aaKnown RBP13.16□□□□□ -0.3
GPN3-202ENST00000537466 SCGB3A2Q96PL1 93 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 SDHCQ99643 169 aaPredicted RBP13.16□□□□□ -0.3
GPN3-202ENST00000537466 K7EIM0 57 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 GP9P14770 177 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 TMEM187Q14656 261 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 ZNF57Q68EA5 555 aaPredicted RBP13.16□□□□□ -0.3
GPN3-202ENST00000537466 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 OR1P1Q8NH06 330 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 TMEM56-RWDD3S4R434 201 aa13.16□□□□□ -0.3
GPN3-202ENST00000537466 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
GPN3-202ENST00000537466 IFNA17P01571 189 aa13.15□□□□□ -0.3
GPN3-202ENST00000537466 ZNF114Q8NC26 417 aa13.15□□□□□ -0.3
GPN3-202ENST00000537466 GPR146Q96CH1 333 aa13.15□□□□□ -0.3
GPN3-202ENST00000537466 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
GPN3-202ENST00000537466 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 F8W735 103 aaPredicted RBP13.14□□□□□ -0.31
GPN3-202ENST00000537466 LGALS9O00182 355 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 OR1L6Q8NGR2 347 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 DEDD2Q8WXF8 326 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
GPN3-202ENST00000537466 IGHV3-35A0A0C4DH35 117 aa13.13□□□□□ -0.31
GPN3-202ENST00000537466 C2orf70A6NJV1 201 aa13.13□□□□□ -0.31
GPN3-202ENST00000537466 ERHP84090 104 aaKnown RBP13.13□□□□□ -0.31
GPN3-202ENST00000537466 PLET1Q6UQ28 207 aa13.13□□□□□ -0.31
GPN3-202ENST00000537466 MISP3Q96FF7 219 aa13.13□□□□□ -0.31
GPN3-202ENST00000537466 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
GPN3-202ENST00000537466 CACNG5Q9UF02 275 aa13.13□□□□□ -0.31
GPN3-202ENST00000537466 ZNF320A2RRD8 509 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 INS-IGF2F8WCM5 200 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 I3L2K1 104 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 TGOLN2O43493 480 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 DCTN2Q13561 401 aaKnown RBP13.12□□□□□ -0.31
GPN3-202ENST00000537466 AARDQ4LEZ3 155 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 TRIQKQ629K1 86 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 CACNG8Q8WXS5 425 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 IL22RA2Q969J5 263 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 B9D2Q9BPU9 175 aa13.12□□□□□ -0.31
GPN3-202ENST00000537466 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
GPN3-202ENST00000537466 FOLR2P14207 255 aa13.11□□□□□ -0.31
GPN3-202ENST00000537466 HOXA1P49639 335 aaPredicted RBP13.11□□□□□ -0.31
GPN3-202ENST00000537466 CCR6P51684 374 aa13.11□□□□□ -0.31
GPN3-202ENST00000537466 FAM106AQ4KMX7 169 aa13.11□□□□□ -0.31
GPN3-202ENST00000537466 UBAC2Q8NBM4 344 aa13.11□□□□□ -0.31
GPN3-202ENST00000537466 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
GPN3-202ENST00000537466 CHRDL1Q9BU40 450 aa13.11□□□□□ -0.31
GPN3-202ENST00000537466 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.11□□□□□ -0.31
GPN3-202ENST00000537466 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms