RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 MTCH1Q9NZJ7 389 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TP73-AS1Q9UF72 201 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 U3KQA8 63 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 FREM3P0C091 2139 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TRGV10A0A0A0MS01 117 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 A0A0G2JRQ6 117 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TSPAN13O95857 204 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 IZUMO4Q1ZYL8 232 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 SPATA12Q7Z6I5 190 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 ZDHHC23Q8IYP9 409 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TRIB1Q96RU8 372 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 OR2D2Q9H210 308 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 GP6Q9HCN6 339 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 OR5AL1P0C617 328 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TFF3Q07654 80 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 OR10D3Q8NH80 312 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 FAM110AQ9BQ89 295 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 HES4Q9HCC6 221 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 HILPDAQ9Y5L2 63 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 DNAH12Q6ZR08 3092 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 KIAA2026Q5HYC2 2103 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TRBV20OR9-2A0A075B6H5 130 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TRAV38-1A0A0B4J264 116 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 ARL14EPLP0DKL9 152 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 COX6B1P14854 86 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 PCBD1P61457 104 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 GAGE5Q13069 117 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 GAGE6Q13070 117 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 KLF5Q13887 457 aaPredicted RBP9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 SSX8Q7RTT4 187 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 RND1Q92730 232 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TAAR6Q96RI8 345 aa9.08□□□□□ -0.96
CLSTN3-207ENST00000537408 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 LRRC30A6NM36 301 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 EDDM3BP56851 147 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 CEACAM16Q2WEN9 425 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 PPP1R32Q7Z5V6 425 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 GJC3Q8NFK1 279 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 HINT2Q9BX68 163 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 HELTA6NFD8 242 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 CELA3AP09093 270 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 FKBP2P26885 142 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 SUMO3P55854 103 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 PSG7Q13046 419 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 JPT1Q9UK76 154 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 TEX50A0A1B0GTY4 177 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 SHISA8B8ZZ34 492 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 K7EN84 100 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 GPR12P47775 334 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 ADTRPQ96IZ2 230 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 KIAA1549LQ6ZVL6 1849 aa9.07□□□□□ -0.96
CLSTN3-207ENST00000537408 KBTBD11-OT1A0A1B0GTJ5 212 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 A1L4Q6 167 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 MS4A18H0YCH9 400 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 CDAP32320 146 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 FXYD3Q14802 87 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 MS4A18Q3C1V0 323 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 OR4X2Q8NGF9 303 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 ZNF835Q9Y2P0 537 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 DOCK11Q5JSL3 2073 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 LIPT2A6NK58 231 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 CGAP01215 116 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 IBA57Q5T440 356 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 GRAMD2BQ96HH9 432 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 MPDZO75970 2070 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 IGKV1D-13A0A0B4J2D9 117 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 SP1P08047 785 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 IGKV1-13P0DP09 117 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 SSBP2P81877 361 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 CENPWQ5EE01 88 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 PTPRQQ9UMZ3 2332 aa9.06□□□□□ -0.96
CLSTN3-207ENST00000537408 F8W1H4 67 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 MFAP2P55001 183 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 DTX1Q86Y01 620 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 PKIBQ9C010 78 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 CHD8Q9HCK8 2581 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 SNAI2O43623 268 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 CXCL13O43927 109 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 SPINK8P0C7L1 97 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 MKXQ8IYA7 352 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 OR9G4Q8NGQ1 327 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 OR52E5Q8NH55 327 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 GALMQ96C23 342 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 OR9G9P0C7N8 305 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 RBM11P57052 281 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 PDCD1Q15116 288 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 FOXI2Q6ZQN5 318 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 GPR82Q96P67 336 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 TIMM8BQ9Y5J9 83 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 IGHV1-45A0A0A0MS14 117 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 ESPL1Q14674 2120 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms