RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 SCPEP1Q9HB40 452 aa10.38□□□□□ -0.75
SYNE1-235ENST00000537033 FAM212BQ9NTI7 297 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-235ENST00000537033 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
SYNE1-235ENST00000537033 TP53TG1Q9Y2A0 90 aa10.38□□□□□ -0.75
SYNE1-235ENST00000537033 STARD9Q9P2P6 4700 aa10.38□□□□□ -0.75
SYNE1-235ENST00000537033 CXorf65A6NEN9 183 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 C15orf62A8K5M9 175 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 K7EMT4 169 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 UBE2CO00762 179 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
SYNE1-235ENST00000537033 TNFAIP8O95379 198 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 EIF4EP06730 217 aaKnown RBP10.37□□□□□ -0.75
SYNE1-235ENST00000537033 MFAP2P55001 183 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 Q6ZWC4 215 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 H2BFWTQ7Z2G1 175 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 OR1P1Q8NH06 330 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 GPX8Q8TED1 209 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 C6orf62Q9GZU0 229 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-235ENST00000537033 COMMD3Q9UBI1 195 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 RYR2Q92736 4967 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 LYSTQ99698 3801 aa10.37□□□□□ -0.75
SYNE1-235ENST00000537033 IGHV3OR16-8A0A075B7F1 116 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 K7EIM0 57 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 SPRY2O43597 315 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 ZNF207O43670 478 aaKnown RBP10.36□□□□□ -0.75
SYNE1-235ENST00000537033 APOA1P02647 267 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 BMI1P35226 326 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 RCVRNP35243 200 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 ADMP35318 185 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 DEFB135Q30KP9 77 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 SNX29P2Q8IUI4 249 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 LYSMD2Q8IV50 215 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 STPG3Q8N7X2 389 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 CMTM3Q96MX0 182 aa10.36□□□□□ -0.75
SYNE1-235ENST00000537033 KIR2DL5BA0A0G2JN68 375 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 KIR2DL5BA0A0G2JPC4 375 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 F8W735 103 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-235ENST00000537033 YIF1AO95070 293 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 MFAP4P55083 255 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 PMS2P11Q13670 270 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 WFDC3Q8IUB2 231 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 KIR2DL5AQ8N109 375 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 KIR2DL5BQ8NHK3 375 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 SACSQ9NZJ4 4579 aa10.35□□□□□ -0.75
SYNE1-235ENST00000537033 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 DBX1A6NMT0 343 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 CTSDP07339 412 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-235ENST00000537033 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
SYNE1-235ENST00000537033 UCP3P55916 312 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 ERHP84090 104 aaKnown RBP10.34□□□□□ -0.75
SYNE1-235ENST00000537033 PRCDQ00LT1 54 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 TMEM217Q8N7C4 229 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 ZNF114Q8NC26 417 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 TMEM116Q8NCL8 245 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 MRGPRFQ96AM1 343 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 GALNT14Q96FL9 552 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 SEC22AQ96IW7 307 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 TXN2Q99757 166 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 SMPXQ9UHP9 88 aa10.34□□□□□ -0.75
SYNE1-235ENST00000537033 IGHV7-4-1A0A0J9YVY3 117 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 GNG7O60262 68 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 MT-CO2P00403 227 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 CTSGP08311 255 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-235ENST00000537033 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-235ENST00000537033 NCS1P62166 190 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 MZT2AQ6P582 158 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 PINX1Q96BK5 328 aaKnown RBP10.33□□□□□ -0.76
SYNE1-235ENST00000537033 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
SYNE1-235ENST00000537033 FAM25AB3EWG3 89 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 FAM25CB3EWG5 89 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 FAM25GB3EWG6 89 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 I3L2K1 104 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 HPGDSO60760 199 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 ATG12O94817 140 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 PGAM2P15259 253 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 ELK1P19419 428 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 RORCP51449 518 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 AKR1C2P52895 323 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 HSPE1P61604 102 aaKnown RBP10.32□□□□□ -0.76
SYNE1-235ENST00000537033 VBP1P61758 197 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 SLC35G3Q8N808 338 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 AP3S1Q92572 193 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 RNF183Q96D59 192 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 ZNF486Q96H40 463 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-235ENST00000537033 OR10C1Q96KK4 312 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 RNF2Q99496 336 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 PDCD10Q9BUL8 212 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 FUNDC2Q9BWH2 189 aa10.32□□□□□ -0.76
SYNE1-235ENST00000537033 NXF2Q9GZY0 626 aaKnown RBP10.32□□□□□ -0.76
SYNE1-235ENST00000537033 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
SYNE1-235ENST00000537033 TRAV14DV4A0A0A6YYC5 116 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms