RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 STAG3L3P0CL85 134 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 KIAA0141Q14154 515 aaPredicted RBP11.02□□□□□ -0.64
SMG6-203ENST00000536871 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.64
SMG6-203ENST00000536871 WDR25Q64LD2 544 aaPredicted RBP11.02□□□□□ -0.64
SMG6-203ENST00000536871 ZNF841Q6ZN19 808 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 RNF2Q99496 336 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 ZFHX4Q86UP3 3567 aa11.02□□□□□ -0.64
SMG6-203ENST00000536871 IGHV2-26A0A0B4J1V2 119 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 CLDN34H7C241 214 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 LIPFP07098 398 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 COL8A2P25067 703 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 AKR1C3P42330 323 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 UNQ6494/PRO21346Q6UXR6 183 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 C11orf42Q8N5U0 333 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 SMIM7Q9BQ49 75 aa11.02□□□□□ -0.65
SMG6-203ENST00000536871 PRRC2CQ9Y520 2896 aaKnown RBP11.01□□□□□ -0.65
SMG6-203ENST00000536871 TMEM8BA6NDV4 472 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 TCAPO15273 167 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 YIF1AO95070 293 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
SMG6-203ENST00000536871 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
SMG6-203ENST00000536871 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
SMG6-203ENST00000536871 PRR20EP86478 221 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 PRR20CP86479 221 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 PRR20DP86480 221 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 PRR20BP86481 221 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 PRR20AP86496 221 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 CD69Q07108 199 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 DTX2Q86UW9 622 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
SMG6-203ENST00000536871 RP1L1Q8IWN7 2480 aaPredicted RBP11.01□□□□□ -0.65
SMG6-203ENST00000536871 OPN1MWP04001 364 aa11□□□□□ -0.65
SMG6-203ENST00000536871 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
SMG6-203ENST00000536871 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
SMG6-203ENST00000536871 NUTF2P61970 127 aaKnown RBP11□□□□□ -0.65
SMG6-203ENST00000536871 ETFRF1Q6IPR1 90 aa11□□□□□ -0.65
SMG6-203ENST00000536871 C11orf71Q6IPW1 123 aa11□□□□□ -0.65
SMG6-203ENST00000536871 FAM24BQ8N5W8 94 aa11□□□□□ -0.65
SMG6-203ENST00000536871 STPG3Q8N7X2 389 aa11□□□□□ -0.65
SMG6-203ENST00000536871 LY6G5BQ8NDX9 201 aa11□□□□□ -0.65
SMG6-203ENST00000536871 OR4F5Q8NH21 305 aa11□□□□□ -0.65
SMG6-203ENST00000536871 OR4F4Q96R69 305 aa11□□□□□ -0.65
SMG6-203ENST00000536871 IFITM10A6NMD0 228 aa11□□□□□ -0.65
SMG6-203ENST00000536871 C11orf94C9JXX5 98 aa11□□□□□ -0.65
SMG6-203ENST00000536871 M0R1W7 72 aa11□□□□□ -0.65
SMG6-203ENST00000536871 IGLV2-23P01705 113 aa11□□□□□ -0.65
SMG6-203ENST00000536871 RND2P52198 227 aa11□□□□□ -0.65
SMG6-203ENST00000536871 MIC13Q5XKP0 118 aa11□□□□□ -0.65
SMG6-203ENST00000536871 MRPL52Q86TS9 123 aaKnown RBP11□□□□□ -0.65
SMG6-203ENST00000536871 ISOC2Q96AB3 205 aa11□□□□□ -0.65
SMG6-203ENST00000536871 CHODLQ9H9P2 273 aa11□□□□□ -0.65
SMG6-203ENST00000536871 SLC45A2Q9UMX9 530 aa11□□□□□ -0.65
SMG6-203ENST00000536871 INSIG2Q9Y5U4 225 aa11□□□□□ -0.65
SMG6-203ENST00000536871 CFAP47Q6ZTR5 3102 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 POLEQ07864 2286 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 BUB1B-PAK6H3BSN5 160 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 PPP1R2P9O14990 202 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 PAGE4O60829 102 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 C1QTNF9P0C862 333 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 TAS2R45P59539 299 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 C4orf17Q53FE4 359 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 SPNS3Q6ZMD2 512 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 DOK5Q9P104 306 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 ZNRD1Q9P1U0 126 aa10.99□□□□□ -0.65
SMG6-203ENST00000536871 CORTO00230 105 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 ACTL6BO94805 426 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 CEACAM3P40198 252 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 REG1BP48304 166 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 BTF3L4Q96K17 158 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
SMG6-203ENST00000536871 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
SMG6-203ENST00000536871 PARLQ9H300 379 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 PATZ1Q9HBE1 687 aaKnown RBP10.98□□□□□ -0.65
SMG6-203ENST00000536871 HCFC1P51610 2035 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
SMG6-203ENST00000536871 GOSR1O95249 250 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 SELENOTP62341 195 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 PQLC2Q6ZP29 291 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 C1orf122Q6ZSJ8 110 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 OR4P4Q8NGL7 312 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 RPEQ96AT9 228 aa10.98□□□□□ -0.65
SMG6-203ENST00000536871 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
SMG6-203ENST00000536871 MGAQ8IWI9 3026 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 IGHV1-3A0A0C4DH29 117 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 CD99P14209 185 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 PAX2Q02962 417 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 GAMTQ14353 236 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 ELOBQ15370 118 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 HIST3H2BBQ8N257 126 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 SSMEM1Q8WWF3 244 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 C22orf15Q8WYQ4 148 aa10.97□□□□□ -0.65
SMG6-203ENST00000536871 C1orf159Q96HA4 380 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms