RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SSTR5P35346 364 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 PPOXP50336 477 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 TNXAQ16473 311 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 PEF1Q9UBV8 284 aaKnown RBP11.59□□□□□ -0.55
LIG1-203ENST00000536218 KCNS2Q9ULS6 477 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 A0A087X0K7 114 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 TM4SF5O14894 197 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 HAND1O96004 215 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 IGHG3P01860 377 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 KIR2DL2P43627 348 aaPredicted RBP11.58□□□□□ -0.56
LIG1-203ENST00000536218 UBE2G1P62253 170 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 OR4P4Q8NGL7 312 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 NBEAQ8NFP9 2946 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 BMPR1BO00238 502 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 KLK10O43240 276 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 RBMXL2O75526 392 aaKnown RBP11.58□□□□□ -0.56
LIG1-203ENST00000536218 MT-CO2P00403 227 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 PRR31Q5SQ13 230 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 ATP23Q9Y6H3 246 aa11.58□□□□□ -0.56
LIG1-203ENST00000536218 IGKV1-6A0A0C4DH72 117 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 H0YJW9 148 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 CDIPTO14735 213 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 ZADH2Q8N4Q0 377 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 DLL3Q9NYJ7 618 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 MPC1Q9Y5U8 109 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 DMXL2Q8TDJ6 3036 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 PPIAL4DF5H284 164 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 H0Y8G0 127 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 CLDN14O95500 239 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 UQCRFS1P47985 274 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 SLC25A34Q6PIV7 304 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 C20orf204Q6ZNR8 217 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 KIR3DL3Q8N743 410 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 C7orf71A4D174 169 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 SNAI2O43623 268 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 APOBEC3AP31941 199 aaPredicted RBP11.57□□□□□ -0.56
LIG1-203ENST00000536218 FABP6P51161 128 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 RPL31P62899 125 aaKnown RBP11.57□□□□□ -0.56
LIG1-203ENST00000536218 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 Q6ZT83 130 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 NINJ1Q92982 152 aa11.57□□□□□ -0.56
LIG1-203ENST00000536218 CEP295Q9C0D2 2601 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 PCNX1Q96RV3 2341 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 FAM231BA6NCW3 169 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 PRR33A8MZF0 331 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 K7EM74 188 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 APOA2P02652 100 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 APCSP02743 223 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 RHOBP62745 196 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 IGFL2Q6UWQ7 119 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 OR8B2Q96RD0 313 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
LIG1-203ENST00000536218 OBP2BQ9NPH6 170 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 MPV17P39210 176 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 SCGB2A2Q13296 93 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 SPATA12Q7Z6I5 190 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 DOLPP1Q86YN1 238 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 STPG3Q8N7X2 389 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
LIG1-203ENST00000536218 ANKRD11Q6UB99 2663 aaPredicted RBP11.56□□□□□ -0.56
LIG1-203ENST00000536218 ROS1P08922 2347 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 A0A1B0GV72 72 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 AHRRA9YTQ3 701 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 TUSC2O75896 110 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 MT-ND6P03923 174 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 LINC00869P0C866 280 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 AZU1P20160 251 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 RPL24P83731 157 aaKnown RBP11.55□□□□□ -0.56
LIG1-203ENST00000536218 WDR86Q86TI4 376 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 ATMQ13315 3056 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 TRAV24A0A0B4J272 114 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 CD5LO43866 347 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 PRSS57Q6UWY2 283 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 ZNF826PQ6ZT77 177 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 RPRMLQ8N4K4 120 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 MCRIP2Q9BUT9 160 aaKnown RBP11.55□□□□□ -0.56
LIG1-203ENST00000536218 RTL8AQ9BWD3 113 aa11.55□□□□□ -0.56
LIG1-203ENST00000536218 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
LIG1-203ENST00000536218 KIR2DS1A0A191URI9 304 aa11.54□□□□□ -0.56
LIG1-203ENST00000536218 RAMP3O60896 148 aa11.54□□□□□ -0.56
LIG1-203ENST00000536218 COL8A2P25067 703 aa11.54□□□□□ -0.56
LIG1-203ENST00000536218 KIR2DS4P43632 304 aa11.54□□□□□ -0.56
LIG1-203ENST00000536218 CEBPDP49716 269 aaPredicted RBP11.54□□□□□ -0.56
LIG1-203ENST00000536218 KIR2DS1Q14954 304 aa11.54□□□□□ -0.56
LIG1-203ENST00000536218 GTF2H5Q6ZYL4 71 aa11.54□□□□□ -0.56
LIG1-203ENST00000536218 KLF14Q8TD94 323 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms