RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ZNF846Q147U1 533 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 BEAN1Q3B7T3 259 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 AARDQ4LEZ3 155 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 NMSQ5H8A3 153 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 KPRPQ5T749 579 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 HSD17B13Q7Z5P4 300 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 FAM219AQ8IW50 185 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 RNASE11Q8TAA1 199 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DCUN1D4Q92564 292 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DPF1Q92782 380 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DLX4Q92988 240 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 RCC1LQ96I51 464 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 CCDC140Q96MF4 163 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 CACNG5Q9UF02 275 aa8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 F11RQ9Y624 299 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-208ENST00000536194 A0A0B4J2A0 478 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 BMPR1BO00238 502 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 UPK1BO75841 260 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DHFRP00374 187 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 IGHV3-23P01764 117 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 HIST1H1BP16401 226 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ANXA7P20073 488 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 HOXD3P31249 432 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 MECP2P51608 486 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 C11orf87Q6NUJ2 197 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 LGI3Q8N145 548 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 OR2C3Q8N628 320 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PEF1Q9UBV8 284 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SHPKQ9UHJ6 478 aa8.69□□□□□ -1.02
TNFRSF1A-208ENST00000536194 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 C9orf170A2RU37 121 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 NXPH3O95157 252 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 IFNA17P01571 189 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 TCRBP04435 133 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ANXA3P12429 323 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 UBE2MP61081 183 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SRPXP78539 464 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ASAH1Q13510 395 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PDLIM3Q53GG5 364 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 LRTM2Q8N967 370 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ZNF114Q8NC26 417 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 C20orf85Q9H1P6 137 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PLEKHA3Q9HB20 300 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 NOTCH3Q9UM47 2321 aa8.68□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PPP5D1E7EU14 171 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 K7EIM0 57 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 OVOL1O14753 267 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 WIPF1O43516 503 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DUS4LO95620 317 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 HLA-AP01891 365 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 OR4E1P0C645 316 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DHRS2Q13268 280 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SLC25A24Q6NUK1 477 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 LYG2Q86SG7 212 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 OR1P1Q8NH06 330 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 OR52E5Q8NH55 327 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ZNF502Q8TBZ5 544 aa8.67□□□□□ -1.02
TNFRSF1A-208ENST00000536194 IGHV3-21A0A0B4J1V1 117 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DUXBA0A1W2PPF3 345 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PITX3O75364 302 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PRB2P02812 416 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SULT1A3P0DMM9 295 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SULT1A4P0DMN0 295 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 RNASE2P10153 161 aaKnown RBP8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ZP3P21754 424 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 HOXA1P49639 335 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 KRTAP10-11P60412 298 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SPCS3P61009 180 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 DEFA6Q01524 100 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 EGFEM1PQ0D2K5 195 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 KLF5Q13887 457 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SMCO1Q147U7 214 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 BSXQ3C1V8 233 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 CLEC19AQ6UXS0 136 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 OR52B4Q8NGK2 314 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 EEF1AKMT3Q96AZ1 226 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PDCD10Q9BUL8 212 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 MCRIP2Q9BUT9 160 aaKnown RBP8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 NUDT15Q9NV35 164 aa8.66□□□□□ -1.02
TNFRSF1A-208ENST00000536194 TRAV6A0A075B6T7 132 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 A0A1B0GU03 582 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 MPTX1A8MV57 137 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 I3L2K1 104 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ADAP1O75689 374 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SYNJ2BPP57105 145 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ERHP84090 104 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 TNFRSF9Q07011 255 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 C4orf46Q504U0 113 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 GGNBP1Q5YKI7 109 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 IL34Q6ZMJ4 242 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 VN1R17PQ8TDU5 208 aa8.65□□□□□ -1.02
TNFRSF1A-208ENST00000536194 SCARB1Q8WTV0 552 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms