RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SLC25A10Q9UBX3 287 aaPredicted RBP10.76□□□□□ -0.69
LDLR-203ENST00000535915 Q9UFV3 132 aa10.76□□□□□ -0.69
LDLR-203ENST00000535915 YTHDF2Q9Y5A9 579 aaKnown RBP10.76□□□□□ -0.69
LDLR-203ENST00000535915 LINC00312Q9Y6C7 94 aa10.76□□□□□ -0.69
LDLR-203ENST00000535915 GVINP1Q7Z2Y8 2422 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 SRRM4A7MD48 611 aaKnown RBP10.75□□□□□ -0.69
LDLR-203ENST00000535915 UPK2O00526 184 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 PRRG2O14669 202 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 PRCDQ00LT1 54 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 DOLPP1Q86YN1 238 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 TMEM37Q8WXS4 190 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 LRFN3Q9BTN0 628 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 SH3BGRL2Q9UJC5 107 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 ZNF257Q9Y2Q1 563 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 TRBV20OR9-2A0A075B6H5 130 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 OR4P4Q8NGL7 312 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 NEUROG1Q92886 237 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 GAL3ST2Q9H3Q3 398 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 ARFGEF3Q5TH69 2177 aa10.75□□□□□ -0.69
LDLR-203ENST00000535915 MDFIC2A0A1B0GVS7 189 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 C17orf100A8MU93 164 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 FOXH1O75593 365 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 ACTL6BO94805 426 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 MT-CO2P00403 227 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 HNF1AP20823 631 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 COL8A2P25067 703 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 RPL31P62899 125 aaKnown RBP10.74□□□□□ -0.69
LDLR-203ENST00000535915 TCF15Q12870 199 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 ACTL10Q5JWF8 245 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 SFRP2Q96HF1 295 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 DPRXA6NFQ7 191 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 AMBPP02760 352 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 TYMSP04818 313 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 IL3RAP26951 378 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 BSPH1Q075Z2 132 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 TMEM208Q9BTX3 173 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
LDLR-203ENST00000535915 A0A0U1RQK1 487 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 ZNF320A2RRD8 509 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 DLEU1O43261 78 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
LDLR-203ENST00000535915 CCL3L1P16619 93 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 LCN2P80188 198 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 PRR20EP86478 221 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 PRR20CP86479 221 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 PRR20DP86480 221 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 PRR20BP86481 221 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 PRR20AP86496 221 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 MOB3BQ86TA1 216 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 RNASEH2CQ8TDP1 164 aaKnown RBP10.73□□□□□ -0.69
LDLR-203ENST00000535915 CBLN4Q9NTU7 201 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 FNDC10F2Z333 226 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 ABHD17AQ96GS6 310 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 ACY3Q96HD9 319 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 SAP30LQ9HAJ7 183 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 FKBP11Q9NYL4 201 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 BET1LQ9NYM9 111 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 ELOVL5Q9NYP7 299 aa10.73□□□□□ -0.69
LDLR-203ENST00000535915 APOA2P02652 100 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 NPSP0C0P6 89 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 LINC00869P0C866 280 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 MIR17HGQ75NE6 70 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 SGMS2Q8NHU3 365 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 HARBI1Q96MB7 349 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 ZNF714Q96N38 554 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
LDLR-203ENST00000535915 GCGP01275 180 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 TDGF1P3P51864 188 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 MEF2CQ06413 473 aaPredicted RBP10.72□□□□□ -0.69
LDLR-203ENST00000535915 TMEM144Q7Z5S9 345 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 H1FXQ92522 213 aaKnown RBP10.72□□□□□ -0.69
LDLR-203ENST00000535915 IMMP2LQ96T52 175 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 NABP2Q9BQ15 211 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 SLC45A2Q9UMX9 530 aa10.72□□□□□ -0.69
LDLR-203ENST00000535915 PPIAL4EA0A075B759 164 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 PPIAL4DF5H284 164 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 PPIAL4FP0DN26 164 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 REG1BP48304 166 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 FOXL1Q12952 345 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 PRSS8Q16651 343 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 COA6Q5JTJ3 125 aaKnown RBP10.71□□□□□ -0.69
LDLR-203ENST00000535915 OR5B3Q8NH48 314 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 OSR1Q8TAX0 266 aaPredicted RBP10.71□□□□□ -0.69
LDLR-203ENST00000535915 CCL17Q92583 94 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 PPIAL4AQ9Y536 164 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 SPTBN2O15020 2390 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 IGKV1OR2-108A0A075B7D4 117 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 THBDP07204 575 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 GATA2P23769 480 aaPredicted RBP10.71□□□□□ -0.69
LDLR-203ENST00000535915 PSG5Q15238 335 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 TMEM200BQ69YZ2 307 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms