RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 C9orf62Q8N4C0 152 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 TMEM252Q8N6L7 170 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 C5orf56Q8N8D9 126 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 RNF152Q8N8N0 203 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 Q8N9W7 124 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 OR1P1Q8NH06 330 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 STOML3Q8TAV4 291 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 DCUN1D4Q92564 292 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 PHYHIPLQ96FC7 376 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 RASL11BQ9BPW5 248 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 STRAPQ9Y3F4 350 aaKnown RBP5.17□□□□□ -1.58
CDCA3-205ENST00000535871 ZNF469Q96JG9 3925 aaPredicted RBP5.17□□□□□ -1.58
CDCA3-205ENST00000535871 MTORP42345 2549 aa5.17□□□□□ -1.58
CDCA3-205ENST00000535871 MXRA5Q9NR99 2828 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 IGHV3-72A0A0B4J1Y9 119 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 IGLC7A0M8Q6 106 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 TMEM89A2RUT3 159 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 CEBPZOSA8MTT3 80 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 H3BUA1 57 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 ARPC5O15511 151 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 PLXNB1O43157 2135 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 SSSCA1O60232 199 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 MPDU1O75352 247 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 TMEM50AO95807 157 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 IGLV1-40P01703 118 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 OR8U8P0C7N1 319 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 HKR1P10072 659 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 CD99P14209 185 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 GPX4P36969 197 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 CX3CL1P78423 397 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 CD300CQ08708 224 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 TMEM267Q0VDI3 215 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 EXOSC2Q13868 293 aaKnown RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 PLGLAQ15195 96 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 VWC2Q2TAL6 325 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 LGALSLQ3ZCW2 172 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 LRRC37A5PQ49AS3 106 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 Q5BKY6 102 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 KHDC1LQ5JSQ8 128 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 ETFRF1Q6IPR1 90 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 EIF5AL1Q6IS14 154 aaKnown RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 BRD3OSQ6XYD6 125 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 SSX9Q7RTT3 188 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 VKORC1L1Q8N0U8 176 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 UBAC2Q8NBM4 344 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 SLC24A4Q8NFF2 622 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 OR10P1Q8NGE3 313 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 SGMS2Q8NHU3 365 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 C17orf50Q8WW18 174 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 SRSF12Q8WXF0 261 aaKnown RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 SLC25A33Q9BSK2 321 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 RBKSQ9H477 322 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 HEYLQ9NQ87 328 aaPredicted RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 PSENENQ9NZ42 101 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 OR5AC2Q9NZP5 309 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 VPREB3Q9UKI3 123 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 LSM5Q9Y4Y9 91 aaKnown RBP5.16□□□□□ -1.58
CDCA3-205ENST00000535871 HSPB11Q9Y547 144 aa5.16□□□□□ -1.58
CDCA3-205ENST00000535871 AKAP9Q99996 3911 aa5.15□□□□□ -1.58
CDCA3-205ENST00000535871 BORCS7-ASMTA0A0B4J1R7 106 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 TRAV3A0A0B4J244 114 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 KANTRA0A1W2PQU2 76 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 NCBP2LA6PVI3 153 aaKnown RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 BOLA2-SMG1P6H3BVE0 249 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 BCL2L11O43521 198 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 IGHG2P01859 326 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 HIST1H1BP16401 226 aaKnown RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 CTRB1P17538 263 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 MALP21145 153 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 NPY1RP25929 384 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 SRP14P37108 136 aaKnown RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 SNCAP37840 140 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 CAV2P51636 162 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 DLK1P80370 383 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 SSBP2P81877 361 aaPredicted RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 EWSR1Q01844 656 aaKnown RBP eCLIP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 FXYD3Q14802 87 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 IZUMO4Q1ZYL8 232 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 DEFB112Q30KQ8 113 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 RUSC1-AS1Q66K80 236 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 CTRB2Q6GPI1 263 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 LAMTOR1Q6IAA8 161 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 RBMS3Q6XE24 437 aaKnown RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 PDZD9Q8IXQ8 264 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 Q8N2B8 174 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 TTC9CQ8N5M4 171 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 MAPK1IP1LQ8NDC0 245 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 ARPC1AQ92747 370 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 RITA1Q96K30 269 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 ARL6Q9H0F7 186 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 ARV1Q9H2C2 271 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 FBXL15Q9H469 300 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 SLA2Q9H6Q3 261 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 THYN1Q9P016 225 aa5.15□□□□□ -1.59
CDCA3-205ENST00000535871 F11RQ9Y624 299 aaKnown RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 NSD1Q96L73 2696 aaPredicted RBP5.15□□□□□ -1.59
CDCA3-205ENST00000535871 HIVEP1P15822 2718 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms