RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
CLSTN3-204ENST00000535313 BSCL2Q96G97 398 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-204ENST00000535313 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
CLSTN3-204ENST00000535313 RCVRNP35243 200 aa12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 SPSB3Q6PJ21 355 aa12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 ATP6V0BQ99437 205 aa12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 BCL7BQ9BQE9 202 aa12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 FAM212BQ9NTI7 297 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-204ENST00000535313 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 ELK1P19419 428 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 RORCP51449 518 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 TBC1D26Q86UD7 250 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 SLC38A6Q8IZM9 456 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 SCARB1Q8WTV0 552 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 TMEM14BQ9NUH8 114 aa12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-204ENST00000535313 LOC102724200A0A096LPH7 203 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 FAM25AB3EWG3 89 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 FAM25CB3EWG5 89 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 FAM25GB3EWG6 89 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 NDUFA4O00483 81 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 HPGDSO60760 199 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 MFAP2P55001 183 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 UCP3P55916 312 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 Q56UQ5 140 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 MZT2AQ6P582 158 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 OR4A16Q8NH70 328 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 SPAG8Q99932 426 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 C20orf24Q9BUV8 137 aa12.11□□□□□ -0.47
CLSTN3-204ENST00000535313 LAMTOR1Q6IAA8 161 aa12.1□□□□□ -0.47
CLSTN3-204ENST00000535313 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
CLSTN3-204ENST00000535313 AP3S1Q92572 193 aa12.1□□□□□ -0.47
CLSTN3-204ENST00000535313 CHRDL1Q9BU40 450 aa12.1□□□□□ -0.47
CLSTN3-204ENST00000535313 LYSTQ99698 3801 aa12.09□□□□□ -0.47
CLSTN3-204ENST00000535313 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
CLSTN3-204ENST00000535313 K7EIM0 57 aa12.09□□□□□ -0.47
CLSTN3-204ENST00000535313 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
CLSTN3-204ENST00000535313 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
CLSTN3-204ENST00000535313 K7EMT4 169 aa12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 M0QYG6 137 aa12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 TSPAN4O14817 238 aa12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 NUPL2O15504 423 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 PGAM2P15259 253 aa12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 RELQ04864 619 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 RNASE12Q5GAN4 147 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 MRGPRFQ96AM1 343 aa12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 MISP3Q96FF7 219 aa12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 CCDC59Q9P031 241 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-204ENST00000535313 DNAH1Q9P2D7 4330 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 IGHV3OR16-8A0A075B7F1 116 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 C15orf62A8K5M9 175 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 JTBO76095 146 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 IGKV1-39P01597 117 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 IGKV1D-39P04432 117 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 ADMP35318 185 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 ERHP84090 104 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 PRCDQ00LT1 54 aa12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 RNASE10Q5GAN6 216 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 ZNF486Q96H40 463 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 NXF2Q9GZY0 626 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 RSL24D1Q9UHA3 163 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-204ENST00000535313 OR4C46A6NHA9 309 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 ZNF701M0R085 212 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 YIF1AO95070 293 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 CTSGP08311 255 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 APOC4P55056 127 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 MFAP4P55083 255 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 RND3P61587 244 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 HSPE1P61604 102 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 ZNF114Q8NC26 417 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 C15orf40Q8WUR7 153 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 TXN2Q99757 166 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 EXTL2Q9UBQ6 330 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 KLK11Q9UBX7 282 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 UBQLN2Q9UHD9 624 aa12.06□□□□□ -0.48
CLSTN3-204ENST00000535313 I3L2K1 104 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 CTDSP2O14595 271 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 ATG12O94817 140 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 MT-CO2P00403 227 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 TBPP20226 339 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 FCGR2BP31994 310 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 PIGPP57054 158 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 OR52I2Q8NH67 350 aa12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 PINX1Q96BK5 328 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-204ENST00000535313 A6NHS1 94 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms