RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TSPAN13O95857 204 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 LY6DQ14210 128 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 ZNF837Q96EG3 531 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 IL36BQ9NZH7 164 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 ZFC3H1O60293 1989 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 PRB3Q04118 309 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 SAA2-SAA4A0A096LPE2 208 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 SAA2P0DJI9 122 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 FAM131CQ96AQ9 280 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 FOXC2Q99958 501 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 POLR2AP24928 1970 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 SCO2A0A1W2PP80 73 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 LINC00469Q8N7U9 141 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 PARD6GQ9BYG4 376 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 TMEM133Q9H2Q1 129 aa15.24■□□□□ 0.03
SFSWAP-203ENST00000535236 PQLC2LA1A4F0 135 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 LEMD1Q68G75 181 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 MIR17HGQ75NE6 70 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 MRPL16Q9NX20 251 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 PGPEP1Q9NXJ5 209 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 SVILO95425 2214 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 A0A1B0GW15 77 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 RBMY1BA6NDE4 496 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 RBMY1EA6NEQ0 496 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 RBMY1DP0C7P1 496 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 RBMY1A1P0DJD3 496 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 RBMY1CP0DJD4 496 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 Q6AWC8 147 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 TCF23Q7RTU1 214 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 CD8AP01732 235 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 SLC17A3O00476 420 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 CD7P09564 240 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 SPACA3Q8IXA5 215 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 GLMPQ8WWB7 406 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 CASP8AP2Q9UKL3 1982 aa15.23■□□□□ 0.03
SFSWAP-203ENST00000535236 C1QTNF9BB2RNN3 333 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 DUSP14O95147 198 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 TTC9CQ8N5M4 171 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 PLPPR1Q8TBJ4 325 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 SOX21Q9Y651 276 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 TRBV7-9A0A0J9YWB2 115 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 E9PLN8 166 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 UPK2O00526 184 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 NSUN5P1Q3KNT7 163 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 VKORC1Q9BQB6 163 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 SLC50A1Q9BRV3 221 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 SEC16AO15027 2179 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 CCDC88CQ9P219 2028 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 SCN4AP35499 1836 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 GATA2P23769 480 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 VWCEQ96DN2 955 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 TMEM42Q69YG0 159 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 ZNF815PA8K554 130 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 OR10J3Q5JRS4 329 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 AICDAQ9GZX7 198 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 OTORQ9NRC9 128 aa15.22■□□□□ 0.03
SFSWAP-203ENST00000535236 GTSCR1Q86UQ5 136 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 YPEL1O60688 119 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 OR5AN1Q8NGI8 311 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 YPEL2Q96QA6 119 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 TRAV14DV4A0A0A6YYC5 116 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 DPRXA6NFQ7 191 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 Q5BKY6 102 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 PVRIGQ6DKI7 326 aa15.21■□□□□ 0.03
SFSWAP-203ENST00000535236 RGPD3A6NKT7 1758 aaPredicted RBP15.21■□□□□ 0.02
SFSWAP-203ENST00000535236 NUDT10Q8NFP7 164 aa15.21■□□□□ 0.02
SFSWAP-203ENST00000535236 LYNX1G3V0Z9 82 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 LYNX1P0DP58 116 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 CD24P25063 80 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 NEUROG1Q92886 237 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 WBP1Q96G27 269 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 RHOGP84095 191 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 TDRD6O60522 2096 aaKnown RBP15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 IGLV3-12A0A075B6K2 115 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 ATP5G3P48201 142 aa15.2■□□□□ 0.02
SFSWAP-203ENST00000535236 LOC102723996A0A087X1L8 192 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 DDTP30046 118 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 ZP1P60852 638 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 NHLRC3Q5JS37 347 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 FAM209BQ5JX69 171 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 ASCL2Q99929 193 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 ATAD5Q96QE3 1844 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 ORMDL3Q8N138 153 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 COL11A2P13942 1736 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 FABP5P3A8MUU1 101 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 TMEM50AO95807 157 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 C21orf62-AS1Q17RA5 79 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 RTBDNQ9BSG5 229 aaPredicted RBP15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 TRGV4A0A0C4DH28 118 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 NUDT11Q96G61 164 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 ZCCHC24Q8N2G6 241 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 C11orf44Q8N8P7 122 aa15.19■□□□□ 0.02
SFSWAP-203ENST00000535236 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 CRPP02741 224 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 WNT2P09544 360 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 ZNF600Q6ZNG1 722 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 TMEM144Q7Z5S9 345 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 RNF125Q96EQ8 232 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 ST20Q9HBF5 79 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms