RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CFL1P23528 166 aaKnown RBP-0.84□□□□□ -2.54
COPB1-212ENST00000534771 CD40LGP29965 261 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 DEKP35659 375 aaKnown RBP-0.84□□□□□ -2.54
COPB1-212ENST00000534771 MAGEA2P43356 314 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 RAB13P51153 203 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 H2BFSP57053 126 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 DAOAP59103 153 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 GNA13Q14344 377 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 EXOC3L4Q17RC7 722 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 RNASE10Q5GAN6 216 aaKnown RBP-0.84□□□□□ -2.54
COPB1-212ENST00000534771 SSX6Q7RTT6 188 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 ANGPTL5Q86XS5 388 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 IFT81Q8WYA0 676 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 IFT46Q9NQC8 304 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 TUBG2Q9NRH3 451 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 RMND1Q9NWS8 449 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 HPCAL4Q9UM19 191 aa-0.84□□□□□ -2.54
COPB1-212ENST00000534771 ATRQ13535 2644 aa-0.85□□□□□ -2.54
COPB1-212ENST00000534771 NUP153P49790 1475 aaKnown RBP-0.85□□□□□ -2.55
COPB1-212ENST00000534771 SERTM2A0A1B0GWG4 89 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 COX7A2LO14548 114 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 UGT2B11O75310 529 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 SNAP29O95721 258 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 BGNP21810 368 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 TUBG1P23258 451 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 S100A7P31151 101 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 BCAP31P51572 246 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 VSNL1P62760 191 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 CCDC88AQ3V6T2 1871 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 HIKESHIQ53FT3 197 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 SAPCD1Q5SSQ6 148 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 SYPL2Q5VXT5 272 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 GLIPR1L1Q6UWM5 242 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 Q6ZQY7 126 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 MRPL52Q86TS9 123 aaKnown RBP-0.85□□□□□ -2.55
COPB1-212ENST00000534771 OR7G1Q8NGA0 311 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 OR4E2Q8NGC2 313 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 LGALS14Q8TCE9 139 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 KIAA1143Q96AT1 154 aaPredicted RBP-0.85□□□□□ -2.55
COPB1-212ENST00000534771 CCL13Q99616 98 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 TMEM109Q9BVC6 243 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 METTL9Q9H1A3 318 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 WDR54Q9H977 334 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 CXorf21Q9HAI6 301 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 ORMDL1Q9P0S3 153 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 RSL24D1Q9UHA3 163 aaKnown RBP-0.85□□□□□ -2.55
COPB1-212ENST00000534771 FUT9Q9Y231 359 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 RNF11Q9Y3C5 154 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 HDGFL3Q9Y3E1 203 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 TOPBP1Q92547 1522 aa-0.85□□□□□ -2.55
COPB1-212ENST00000534771 PTPRQQ9UMZ3 2332 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 HEATR5AQ86XA9 2040 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 FABP5P3A8MUU1 101 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 ZNF879B4DU55 563 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 I3L521 148 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 GPR31O00270 319 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 LIN7AO14910 233 aaPredicted RBP-0.86□□□□□ -2.55
COPB1-212ENST00000534771 KDELR3O43731 214 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 APOMO95445 188 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 ASS1P00966 412 aaKnown RBP-0.86□□□□□ -2.55
COPB1-212ENST00000534771 ATP5G1P05496 136 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 MGST1P10620 155 aaKnown RBP-0.86□□□□□ -2.55
COPB1-212ENST00000534771 COX6A1P12074 109 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 PEX19P40855 299 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 RPL18Q07020 188 aaKnown RBP-0.86□□□□□ -2.55
COPB1-212ENST00000534771 DEFB113Q30KQ7 82 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 XKRXQ6PP77 449 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 CLEC2AQ6UVW9 174 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 VMO1Q7Z5L0 202 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 Q86TA4 180 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 SYS1Q8N2H4 156 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 OR10J5Q8NHC4 309 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 GNPNAT1Q96EK6 184 aaPredicted RBP-0.86□□□□□ -2.55
COPB1-212ENST00000534771 CATSPER2Q96P56 530 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 TMEM208Q9BTX3 173 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 PSTPIP2Q9H939 334 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 C14orf105Q9NVL8 296 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 HS3ST2Q9Y278 367 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.86□□□□□ -2.55
COPB1-212ENST00000534771 MAST2Q6P0Q8 1798 aa-0.86□□□□□ -2.55
COPB1-212ENST00000534771 SIP14410 1827 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 ANKRD11Q6UB99 2663 aaPredicted RBP-0.87□□□□□ -2.55
COPB1-212ENST00000534771 TNS3Q68CZ2 1445 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 ITPR1Q14643 2758 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 RBBP6Q7Z6E9 1792 aaKnown RBP-0.87□□□□□ -2.55
COPB1-212ENST00000534771 CSMD3Q7Z407 3707 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 TMED7-TICAM2A0A0A6YYA0 188 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 ZNF727A8MUV8 499 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 LY6G6CO95867 125 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 CRYGCP07315 174 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 FGF6P10767 208 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 CLDN8P56748 225 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 OR10A3P58181 314 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 POLR2GP62487 172 aaKnown RBP eCLIP-0.87□□□□□ -2.55
COPB1-212ENST00000534771 FABP5Q01469 135 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 RHEBQ15382 184 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 SPATA45Q537H7 98 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 OR10J3Q5JRS4 329 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 PIP5KL1Q5T9C9 394 aa-0.87□□□□□ -2.55
COPB1-212ENST00000534771 LRRC6Q86X45 466 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms