RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 MLXQ9UH92 298 aa10.58□□□□□ -0.72
SF3B2-215ENST00000534307 K7EIM0 57 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 CYB5BO43169 146 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 CD7P09564 240 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 P0C879 139 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 C8orf88P0DMB2 117 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 HAGHQ16775 308 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 C15orf40Q8WUR7 153 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 MRGPRFQ96AM1 343 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 WDR89Q96FK6 387 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-215ENST00000534307 ATP6V0BQ99437 205 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 NEURL2Q9BR09 285 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 HINT2Q9BX68 163 aa10.57□□□□□ -0.72
SF3B2-215ENST00000534307 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
SF3B2-215ENST00000534307 CCDC59Q9P031 241 aaKnown RBP10.57□□□□□ -0.72
SF3B2-215ENST00000534307 ZNF320A2RRD8 509 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 GABARAPH6UMI1 98 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TGOLN2O43493 480 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 IFNA6P05013 189 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 PI3P19957 117 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 CD81P60033 236 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TM4SF20Q53R12 229 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 SLC25A24Q6NUK1 477 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 PLET1Q6UQ28 207 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 UXS1Q8NBZ7 420 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 OR1P1Q8NH06 330 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 SCARB1Q8WTV0 552 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TMEM190Q8WZ59 177 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 CITED4Q96RK1 184 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 TP53RKQ96S44 253 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 EDA2RQ9HAV5 297 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 PLEKHA3Q9HB20 300 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 SLC2A8Q9NY64 477 aa10.56□□□□□ -0.72
SF3B2-215ENST00000534307 OR2T8A6NH00 312 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 ADMP35318 185 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-215ENST00000534307 PIGPP57054 158 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 PRCDQ00LT1 54 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 SSBP1Q04837 148 aaKnown RBP10.55□□□□□ -0.72
SF3B2-215ENST00000534307 ZNF57Q68EA5 555 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-215ENST00000534307 H2BFWTQ7Z2G1 175 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 OR2C3Q8N628 320 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 ZNF114Q8NC26 417 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 OR1L6Q8NGR2 347 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 TERB2Q8NHR7 220 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 MARC2Q969Z3 335 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 BSCL2Q96G97 398 aaPredicted RBP10.55□□□□□ -0.72
SF3B2-215ENST00000534307 CHRDL1Q9BU40 450 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
SF3B2-215ENST00000534307 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 TUBA4BQ9H853 241 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 SELENOKQ9Y6D0 94 aa10.55□□□□□ -0.72
SF3B2-215ENST00000534307 RYR1P21817 5038 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 IGHV3-21A0A0B4J1V1 117 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 IGHV3-35A0A0C4DH35 117 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 ZNF701M0R085 212 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-215ENST00000534307 RGS5O15539 181 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 PGAM2P15259 253 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 TAS2R19P59542 299 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 MRPS10P82664 201 aaKnown RBP10.54□□□□□ -0.72
SF3B2-215ENST00000534307 GUCA2BQ16661 112 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 IZUMO4Q1ZYL8 232 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 STEAP1BQ6NZ63 245 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 SPSB3Q6PJ21 355 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 BTNL8Q6UX41 500 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 OR13C8Q8NGS7 320 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 OR4A16Q8NH70 328 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 SMIM4Q8WVI0 70 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 PALMDQ9NP74 551 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 MRPL27Q9P0M9 148 aaKnown RBP10.54□□□□□ -0.72
SF3B2-215ENST00000534307 UFC1Q9Y3C8 167 aa10.54□□□□□ -0.72
SF3B2-215ENST00000534307 A0A0B4J293 547 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
SF3B2-215ENST00000534307 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
SF3B2-215ENST00000534307 OR11H12B2RN74 326 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 INS-IGF2F8WCM5 200 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 I3L2K1 104 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 CTDSPLO15194 276 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 RAB3DO95716 219 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
SF3B2-215ENST00000534307 PPP5CP53041 499 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 HSPE1P61604 102 aaKnown RBP10.53□□□□□ -0.72
SF3B2-215ENST00000534307 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
SF3B2-215ENST00000534307 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 C3orf85A0A1B0GTC6 90 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 NDUFA4O00483 81 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 CTSGP08311 255 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 UCP1P25874 307 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 FCGR2BP31994 310 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-215ENST00000534307 FAAP20Q6NZ36 180 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
SF3B2-215ENST00000534307 MARCH1Q8TCQ1 289 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms