RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FHL5Q5TD97 284 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 AADACL3Q5VUY0 350 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 ZFAND6Q6FIF0 208 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TGIF2LYQ8IUE0 185 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CA13Q8N1Q1 262 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 LRRC25Q8N386 305 aaPredicted RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 MFSD8Q8NHS3 518 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 THEM6Q8WUY1 208 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 RXFP2Q8WXD0 754 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 ARPC1AQ92747 370 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 GABRG3Q99928 467 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 SLC35B3Q9H1N7 401 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 ENY2Q9NPA8 101 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 COMMD9Q9P000 198 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 LSM2Q9Y333 95 aaKnown RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 DNAH12Q6ZR08 3092 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 EPOPA6NHQ4 379 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 FABP5P3A8MUU1 101 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 M0R2Z0 102 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CDX4O14627 284 aaPredicted RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 YPEL1O60688 119 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CNMDO75829 334 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CXCL1P09341 107 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 PGA4P0DJD7 388 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 PGA5P0DJD9 388 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 IGLC2P0DOY2 106 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 IGLC3P0DOY3 106 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 VDAC1P21796 283 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 RUNX3Q13761 415 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 MRPL54Q6P161 138 aaKnown RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 ZNF343Q6P1L6 599 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TNFAIP8L2Q6P589 184 aaPredicted RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CALHM3Q86XJ0 350 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 RNF175Q8N4F7 328 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 DEFB125Q8N687 156 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 GPR32P1Q8NGA4 272 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 OR52R1Q8NGF1 315 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 OR2G3Q8NGZ4 309 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 OR52P1PQ8NH57 321 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 PP6455Q8WZ26 134 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 YPEL2Q96QA6 119 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 HSPB9Q9BQS6 159 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 RNF126Q9BV68 326 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 SRXN1Q9BYN0 137 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 POLR2J3Q9H1A7 115 aaKnown RBP2.68□□□□□ -1.98
CSMD3-210ENST00000534172 OR51I1Q9H343 314 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 KCNIP1Q9NZI2 227 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CYSLTR1Q9Y271 337 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 CEP250Q9BV73 2442 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 TEX15Q9BXT5 2789 aa2.68□□□□□ -1.98
CSMD3-210ENST00000534172 COL5A1P20908 1838 aaPredicted RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 A0A0G2JLM5 398 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TRDV1A0A1B0GX56 115 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 F5H5K5 113 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 GABARAPH6UMI1 98 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TAX1BP3O14907 124 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CD5LO43866 347 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SLC16A7O60669 478 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 HYPMO75409 117 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 AKAIN1P0CW23 69 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CT45A6P0DMU7 189 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CT45A5P0DMU8 189 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CT45A7P0DMV0 189 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 EVI2AP22794 236 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 HTR1DP28221 377 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TSPOP30536 169 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CTRLP40313 264 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 KIR2DS2P43631 304 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 FOXA1P55317 472 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TCL1AP56279 114 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TAS2R31P59538 309 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 GRB2P62993 217 aaKnown RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 EDDM3AQ14507 147 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 LPAL2Q16609 132 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CT45A1Q5HYN5 189 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CLEC12AQ5QGZ9 265 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 AMMECR1LQ6DCA0 310 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 COMMD6Q7Z4G1 85 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 BLIDQ8IZY5 108 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 UMODL1-AS1Q8N2C9 162 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ZADH2Q8N4Q0 377 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TTC9CQ8N5M4 171 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 POM121L12Q8N7R1 296 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 OR51T1Q8NGJ9 327 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 OR4X1Q8NH49 305 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 CT45A3Q8NHU0 189 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SMIM19Q96E16 107 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TBL1YQ9BQ87 522 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 SLC25A21Q9BQT8 299 aaPredicted RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 DPY30Q9C005 99 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 POPDC3Q9HBV1 291 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 GPR84Q9NQS5 396 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TMEM106BQ9NUM4 274 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 OTOGLQ3ZCN5 2332 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 ZFC3H1O60293 1989 aaKnown RBP2.67□□□□□ -1.98
CSMD3-210ENST00000534172 IGSF10Q6WRI0 2623 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 MICAL3Q7RTP6 2002 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 TRAV14DV4A0A0A6YYC5 116 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 IGKV3D-20A0A0C4DH25 116 aa2.67□□□□□ -1.98
CSMD3-210ENST00000534172 A0A1B0GX51 115 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms