RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 AMMECR1Q9Y4X0 333 aaPredicted RBP4.94□□□□□ -1.62
CMTM1-220ENST00000534143 MINOS1-NBL1R4GNA1 71 aa4.94□□□□□ -1.62
CMTM1-220ENST00000534143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.94□□□□□ -1.62
CMTM1-220ENST00000534143 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 MTORP42345 2549 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 ACANP16112 2415 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TRAV14DV4A0A0A6YYC5 116 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 IGHV1-69DA0A0B4J2H0 117 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 A0A1B0GV90 55 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 A0A1W2PRD5 423 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 A0A1W2PRF3 423 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 A0A1W2PRM7 423 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 RNF212BA8MTL3 300 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 OOSP1A8MZH6 123 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 M0QZK8 103 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 RBFOX2O43251 390 aaKnown RBP eCLIP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 GGCTO75223 188 aaKnown RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 JTBO76095 146 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 OR2C1O95371 312 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 CDS2O95674 445 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 IGKV1-39P01597 117 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 IGHV1-69P01742 117 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 GAPDHP04406 335 aaKnown RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 IGKV1D-39P04432 117 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 HLA-GP17693 338 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 HTR1DP28221 377 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 RPS10P46783 165 aaKnown RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 AKR1C2P52895 323 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 NDUFA6P56556 154 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 NHLH2Q02577 135 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 AKR1C1Q04828 323 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 CATR1Q13166 79 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 ZNF674Q2M3X9 581 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 C2orf68Q2NKX9 166 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 MIDNQ504T8 468 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 KLF17Q5JT82 389 aaPredicted RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TPTE2P1Q5T6R2 138 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 LHFPL4Q7Z7J7 247 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 OR51H1Q8NH63 302 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 OR5R1Q8NH85 324 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 CASTOR1Q8WTX7 329 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 ADTRPQ96IZ2 230 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 C18orf12Q96KH6 178 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM56Q96MV1 263 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 CLCC1Q96S66 551 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 MRPL20Q9BYC9 149 aaKnown RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 NMES1Q9C002 83 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM222Q9H0R3 208 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TBL2Q9Y4P3 447 aaKnown RBP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM56-RWDD3S4R434 201 aa4.93□□□□□ -1.62
CMTM1-220ENST00000534143 NIPBLQ6KC79 2804 aaeCLIP4.93□□□□□ -1.62
CMTM1-220ENST00000534143 TRAV40A0A0B4J280 105 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 IGHV1-3A0A0C4DH29 117 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 C13orf42A0A1B0GVH6 325 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 A0A1W2PPI3 338 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 H0YJW9 148 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 NPFFO15130 113 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 RAMP3O60896 148 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 DFFBO76075 338 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 IGHV4-38-2P0DP08 117 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 CD99P14209 185 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 HIST1H1BP16401 226 aaKnown RBP4.92□□□□□ -1.62
CMTM1-220ENST00000534143 ADCYAP1P18509 176 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 CEACAM3P40198 252 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 KIR2DS2P43631 304 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 LPAR6P43657 344 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 REG1BP48304 166 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 OR2B8PP59922 312 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 DLK1P80370 383 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 AWAT1Q58HT5 328 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 CLEC9AQ6UXN8 241 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 MRPL52Q86TS9 123 aaKnown RBP4.92□□□□□ -1.62
CMTM1-220ENST00000534143 TGIF2LXQ8IUE1 241 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 SELENOHQ8IZQ5 122 aaKnown RBP4.92□□□□□ -1.62
CMTM1-220ENST00000534143 LGI3Q8N145 548 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 DYNAPQ8N1N2 210 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 UBAC2Q8NBM4 344 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 CD300LFQ8TDQ1 290 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 TMED6Q8WW62 240 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 IL22RA2Q969J5 263 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 RPEQ96AT9 228 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 SMIM8Q96KF7 97 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 EIF5A2Q9GZV4 153 aaKnown RBP4.92□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM231Q9H6L2 316 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 SLC35D1Q9NTN3 355 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 LIN7CQ9NUP9 197 aaKnown RBP4.92□□□□□ -1.62
CMTM1-220ENST00000534143 ABCA1O95477 2261 aa4.92□□□□□ -1.62
CMTM1-220ENST00000534143 DUXBA0A1W2PPF3 345 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 C7orf77A4D0Y5 90 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 CXorf65A6NEN9 183 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 FAM90A9PA6NNJ1 464 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 UMAD1C9J7I0 102 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 CD5LO43866 347 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 FCGR3BO75015 233 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 ADAP1O75689 374 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 S1PR2O95136 353 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 HPRT1P00492 218 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 IFNA21P01568 189 aa4.91□□□□□ -1.62
CMTM1-220ENST00000534143 IGKV1-5P01602 117 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms