RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
CTTN-215ENST00000533931 IGLV11-55A0A075B6I3 123 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 TCRBV4S1A1TA0A5B7 111 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
CTTN-215ENST00000533931 ID3Q02535 119 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 BSXQ3C1V8 233 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 PVRIGQ6DKI7 326 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 NOXA1Q86UR1 476 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 ZBTB8BQ8NAP8 495 aaPredicted RBP12.15□□□□□ -0.46
CTTN-215ENST00000533931 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
CTTN-215ENST00000533931 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 ALG5Q9Y673 324 aa12.15□□□□□ -0.46
CTTN-215ENST00000533931 STAB1Q9NY15 2570 aa12.15□□□□□ -0.47
CTTN-215ENST00000533931 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 SSNA1O43805 119 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 APELAP0DMC3 54 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 DEFA4P12838 97 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 SNCAP37840 140 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 HTR2BP41595 481 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
CTTN-215ENST00000533931 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
CTTN-215ENST00000533931 RPL23AP62750 156 aaKnown RBP12.14□□□□□ -0.47
CTTN-215ENST00000533931 ZNF491Q8N8L2 437 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 OR10C1Q96KK4 312 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 C2orf50Q96LR7 162 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
CTTN-215ENST00000533931 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
CTTN-215ENST00000533931 C5orf51A6NDU8 294 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 CORTO00230 105 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 TRGV3P03979 118 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 RPLP1P05386 114 aaKnown RBP12.13□□□□□ -0.47
CTTN-215ENST00000533931 TPPP2P59282 170 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
CTTN-215ENST00000533931 RUNX1Q01196 453 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
CTTN-215ENST00000533931 DTD1Q8TEA8 209 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 ASB13Q8WXK3 278 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 ATP6V0BQ99437 205 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 P2RX4Q99571 388 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 RBKSQ9H477 322 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
CTTN-215ENST00000533931 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 U3KQ87 197 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
CTTN-215ENST00000533931 C13orf42A0A1B0GVH6 325 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 SYNGR2O43760 224 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 REG1AP05451 166 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 RHOGP84095 191 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 IL15RAQ13261 267 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 SLC24A4Q8NFF2 622 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 C4orf3Q8WVX3 66 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 NMES1Q9C002 83 aa12.12□□□□□ -0.47
CTTN-215ENST00000533931 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 CCSO14618 274 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 GOSR2O14653 212 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 RNASE2P10153 161 aaKnown RBP12.11□□□□□ -0.47
CTTN-215ENST00000533931 TAS2R30P59541 319 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 RPP30P78346 268 aaKnown RBP12.11□□□□□ -0.47
CTTN-215ENST00000533931 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
CTTN-215ENST00000533931 C2orf68Q2NKX9 166 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 VN1R17PQ8TDU5 208 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 MS4A10Q96PG2 267 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 ANK2Q01484 3957 aa12.11□□□□□ -0.47
CTTN-215ENST00000533931 WRBO00258 174 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 LGALS1P09382 135 aaKnown RBP12.1□□□□□ -0.47
CTTN-215ENST00000533931 NPY1RP25929 384 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 ATP5G2Q06055 141 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
CTTN-215ENST00000533931 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 C11orf44Q8N8P7 122 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
CTTN-215ENST00000533931 MED28Q9H204 178 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 GSKIPQ9P0R6 139 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 MGAT4CQ9UBM8 478 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 FBXL7Q9UJT9 491 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 DMRT1Q9Y5R6 373 aa12.1□□□□□ -0.47
CTTN-215ENST00000533931 M0QZ24 198 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 MBPP02686 304 aaPredicted RBP12.09□□□□□ -0.47
CTTN-215ENST00000533931 PRH1P02810 166 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 MFAP2P55001 183 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 RRAS2P62070 204 aaPredicted RBP12.09□□□□□ -0.47
CTTN-215ENST00000533931 C15orf32Q32M92 178 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 KHDC1LQ5JSQ8 128 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 ZNF343Q6P1L6 599 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 LCNL1Q6ZST4 164 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 OR4F17Q8NGA8 305 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 OR4F4Q96R69 305 aa12.09□□□□□ -0.47
CTTN-215ENST00000533931 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.48
CTTN-215ENST00000533931 I3L521 148 aa12.08□□□□□ -0.48
CTTN-215ENST00000533931 TSC22D2O75157 780 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms