RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 LSM10Q969L4 123 aaKnown RBP13.26□□□□□ -0.29
UBXN1-216ENST00000533908 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 OR51B2Q9Y5P1 312 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 C15orf62A8K5M9 175 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 CHEK1O14757 476 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 CYB5BO43169 146 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 Q56UQ5 140 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 LGALS9CQ6DKI2 356 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 FCGR1BQ92637 280 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 RHPN1-AS1Q9BWJ2 59 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 DIABLOQ9NR28 239 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 HERC2O95714 4834 aa13.25□□□□□ -0.29
UBXN1-216ENST00000533908 IGHV7-4-1A0A0J9YVY3 117 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 TFPI2P48307 235 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 HERV-K104P61576 105 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 ERVK-16P61578 105 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 CADM3Q8N126 398 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 MOB3AQ96BX8 217 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 DGCR14Q96DF8 476 aaKnown RBP13.24□□□□□ -0.29
UBXN1-216ENST00000533908 ZNF2Q9BSG1 426 aaPredicted RBP13.24□□□□□ -0.29
UBXN1-216ENST00000533908 CSTL1Q9H114 145 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 EHFQ9NZC4 300 aa13.24□□□□□ -0.29
UBXN1-216ENST00000533908 VPS13DQ5THJ4 4388 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 LOC100506127A0A0U1RQW1 187 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 PMP2P02689 132 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 CBX5P45973 191 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 NANOS2P60321 138 aaKnown RBP13.23□□□□□ -0.29
UBXN1-216ENST00000533908 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 RARRES2Q99969 163 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
UBXN1-216ENST00000533908 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 MPTX1A8MV57 137 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 I3L2K1 104 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 XRCC3O43542 346 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 IGHV3-48P01763 117 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 PRR20EP86478 221 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 PRR20CP86479 221 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 PRR20DP86480 221 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 PRR20BP86481 221 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 PRR20AP86496 221 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 TMEM116Q8NCL8 245 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 SLC25A46Q96AG3 418 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 OR10C1Q96KK4 312 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 TMEM14BQ9NUH8 114 aa13.22□□□□□ -0.29
UBXN1-216ENST00000533908 SNAPC5O75971 98 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 TGFBR1P36897 503 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 LILRB2Q8N423 598 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 IFT46Q9NQC8 304 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 PRNDQ9UKY0 176 aa13.21□□□□□ -0.29
UBXN1-216ENST00000533908 DEFB4AO15263 64 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 YIF1AO95070 293 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 NAT1P18440 290 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 OR11H2Q8NH07 326 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 MISP3Q96FF7 219 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
UBXN1-216ENST00000533908 YTHDF1Q9BYJ9 559 aaKnown RBP13.2□□□□□ -0.3
UBXN1-216ENST00000533908 NXF2Q9GZY0 626 aaKnown RBP13.2□□□□□ -0.3
UBXN1-216ENST00000533908 TRAV14DV4A0A0A6YYC5 116 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 APOHP02749 345 aaPredicted RBP13.19□□□□□ -0.3
UBXN1-216ENST00000533908 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 MFAP4P55083 255 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 S100A16Q96FQ6 103 aaKnown RBP13.19□□□□□ -0.3
UBXN1-216ENST00000533908 C6orf62Q9GZU0 229 aaPredicted RBP13.19□□□□□ -0.3
UBXN1-216ENST00000533908 FBXL17Q9UF56 701 aa13.19□□□□□ -0.3
UBXN1-216ENST00000533908 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 GPR31O00270 319 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 NUPL2O15504 423 aaKnown RBP13.18□□□□□ -0.3
UBXN1-216ENST00000533908 MT-CO2P00403 227 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 CMC4P56277 68 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-216ENST00000533908 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-216ENST00000533908 PHLDA2Q53GA4 152 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 TCF24Q7RTU0 167 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 OR5H2Q8NGV7 314 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 SEC22AQ96IW7 307 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 TXN2Q99757 166 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
UBXN1-216ENST00000533908 TAS2R20P59543 309 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 NEDD8Q15843 81 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 TOMM20LQ6UXN7 152 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 CMTM1Q8IZ96 169 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 FAM24BQ8N5W8 94 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 TSPAN14Q8NG11 270 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 ST8SIA2Q92186 375 aa13.17□□□□□ -0.3
UBXN1-216ENST00000533908 C11orf68Q9H3H3 251 aaKnown RBP13.17□□□□□ -0.3
UBXN1-216ENST00000533908 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
UBXN1-216ENST00000533908 RPS19P39019 145 aaKnown RBP13.16□□□□□ -0.3
UBXN1-216ENST00000533908 RBMS2Q15434 407 aaKnown RBP13.16□□□□□ -0.3
UBXN1-216ENST00000533908 IZUMO4Q1ZYL8 232 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms