RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 CDS2O95674 445 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 P0C879 139 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 INPP1P49441 399 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
TSKU-204ENST00000533752 TRIQKQ629K1 86 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 VN1R17PQ8TDU5 208 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 GALNT14Q96FL9 552 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 CCDC140Q96MF4 163 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 SRRQ9GZT4 340 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 PLEKHA3Q9HB20 300 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 KCNIP3Q9Y2W7 256 aa12.12□□□□□ -0.47
TSKU-204ENST00000533752 DBX1A6NMT0 343 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 ANXA3P12429 323 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 ARL3P36405 182 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 SRPXP78539 464 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 CLEC19AQ6UXS0 136 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 ZNF114Q8NC26 417 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 OR1P1Q8NH06 330 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 GLYATL2Q8WU03 294 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 ATP6V0BQ99437 205 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 SLC25A21Q9BQT8 299 aaPredicted RBP12.11□□□□□ -0.47
TSKU-204ENST00000533752 SIGLEC8Q9NYZ4 499 aa12.11□□□□□ -0.47
TSKU-204ENST00000533752 MFSD2BA6NFX1 497 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 LY86O95711 162 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 ERHP84090 104 aaKnown RBP12.1□□□□□ -0.47
TSKU-204ENST00000533752 ZNF57Q68EA5 555 aaPredicted RBP12.1□□□□□ -0.47
TSKU-204ENST00000533752 OR2C3Q8N628 320 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 ZNF502Q8TBZ5 544 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 CACFD1Q9UGQ2 172 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 DMRT1Q9Y5R6 373 aa12.1□□□□□ -0.47
TSKU-204ENST00000533752 A0A0B4J293 547 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 LGALS9O00182 355 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 ST8SIA3O43173 380 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 IFNA17P01571 189 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 IGLV1-51P01701 117 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 IZUMO4Q1ZYL8 232 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 DEFB121Q5J5C9 76 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 TMEM268Q5VZI3 342 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 GPHB5Q86YW7 130 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 PRR25Q96S07 402 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 SORL1Q92673 2214 aa12.09□□□□□ -0.47
TSKU-204ENST00000533752 NAP1L6A6NFF2 107 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 CLEC3BP05452 202 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 AKR1C4P17516 323 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 GPR183P32249 361 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 FAM106AQ4KMX7 169 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 SELENOHQ8IZQ5 122 aaKnown RBP12.08□□□□□ -0.48
TSKU-204ENST00000533752 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
TSKU-204ENST00000533752 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 GAR1Q9NY12 217 aaKnown RBP12.08□□□□□ -0.48
TSKU-204ENST00000533752 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 S4R3C0 116 aa12.08□□□□□ -0.48
TSKU-204ENST00000533752 OR2C1O95371 312 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 CSN3P07498 182 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 SPNP16150 400 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 SNCAP37840 140 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 HOXA1P49639 335 aaPredicted RBP12.07□□□□□ -0.48
TSKU-204ENST00000533752 MFAP2P55001 183 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 TMEM187Q14656 261 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 RBMS2Q15434 407 aaKnown RBP12.07□□□□□ -0.48
TSKU-204ENST00000533752 AARDQ4LEZ3 155 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 PLET1Q6UQ28 207 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 IL34Q6ZMJ4 242 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 TMED4Q7Z7H5 227 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 LHFPL5Q8TAF8 219 aa12.07□□□□□ -0.48
TSKU-204ENST00000533752 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.07□□□□□ -0.48
TSKU-204ENST00000533752 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 CENPXA8MT69 81 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 A8MWP6 167 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 K7EIM0 57 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 TGOLN2O43493 480 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 HLA-AP01891 365 aaKnown RBP12.06□□□□□ -0.48
TSKU-204ENST00000533752 GP9P14770 177 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 SUB1P53999 127 aaKnown RBP eCLIP12.06□□□□□ -0.48
TSKU-204ENST00000533752 SPCS3P61009 180 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 LCN12Q6JVE5 192 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 LGI3Q8N145 548 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 MISP3Q96FF7 219 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 C7orf50Q9BRJ6 194 aaKnown RBP12.06□□□□□ -0.48
TSKU-204ENST00000533752 PALMDQ9NP74 551 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 CACNG5Q9UF02 275 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
TSKU-204ENST00000533752 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
TSKU-204ENST00000533752 CORTO00230 105 aa12.05□□□□□ -0.48
TSKU-204ENST00000533752 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
TSKU-204ENST00000533752 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
TSKU-204ENST00000533752 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms