RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SLC35B1P78383 322 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 ERHP84090 104 aaKnown RBP9.31□□□□□ -0.92
COMMD9-208ENST00000533643 FOXE3Q13461 319 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 RAB32Q13637 225 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 AWAT1Q58HT5 328 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 CHAC2Q8WUX2 184 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 TMEM158Q8WZ71 300 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 P2RX4Q99571 388 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 KLK15Q9H2R5 256 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 RCL1Q9Y2P8 373 aaKnown RBP9.31□□□□□ -0.92
COMMD9-208ENST00000533643 DMRT1Q9Y5R6 373 aa9.31□□□□□ -0.92
COMMD9-208ENST00000533643 WRBO00258 174 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 SSSCA1O60232 199 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 TMEM50AO95807 157 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 PRH1P02810 166 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 GIPP09681 153 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-208ENST00000533643 RNASE2P10153 161 aaKnown RBP9.3□□□□□ -0.92
COMMD9-208ENST00000533643 MFAP2P55001 183 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 PAX9P55771 341 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 S100A10P60903 97 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 KLK9Q2XQG4 91 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 BSXQ3C1V8 233 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 TCTEX1D4Q5JR98 221 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 TEX38Q6PEX7 206 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 RNF152Q8N8N0 203 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 ZNF114Q8NC26 417 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 TMEM170AQ8WVE7 144 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 SMIM8Q96KF7 97 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 MS4A10Q96PG2 267 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 FANCD2OSQ96PS1 177 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 HIPK2Q9H2X6 1198 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 C11orf1Q9H5F2 150 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 ZNF355PQ9NSJ1 428 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
COMMD9-208ENST00000533643 LSM5Q9Y4Y9 91 aaKnown RBP9.3□□□□□ -0.92
COMMD9-208ENST00000533643 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
COMMD9-208ENST00000533643 H0YIZ8 118 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 H3BUA1 57 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 BRI3O95415 125 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 ELANEP08246 267 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 PF4V1P10720 104 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 DEFA4P12838 97 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 PSMB8P28062 276 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 SNCAP37840 140 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 HTR2BP41595 481 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 BCAP31P51572 246 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 LRRC37A5PQ49AS3 106 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 PVRIGQ6DKI7 326 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 OR1P1Q8NH06 330 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 PPP1R1CQ8WVI7 109 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 CIB3Q96Q77 187 aaPredicted RBP9.29□□□□□ -0.92
COMMD9-208ENST00000533643 RAB40CQ96S21 281 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 ZFP57Q9NU63 452 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 U3KQ87 197 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 COL6A5A8TX70 2615 aa9.29□□□□□ -0.92
COMMD9-208ENST00000533643 IGLV11-55A0A075B6I3 123 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 TRBV9A0A0B4J1U6 114 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 MPC2O95563 127 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 LY86O95711 162 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 IFNA10P01566 189 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 TRGV3P03979 118 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 RPLP1P05386 114 aaKnown RBP9.28□□□□□ -0.92
COMMD9-208ENST00000533643 CD28P10747 220 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 RAB9AP51151 201 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 SUB1P53999 127 aaKnown RBP eCLIP9.28□□□□□ -0.92
COMMD9-208ENST00000533643 RAP2BP61225 183 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
COMMD9-208ENST00000533643 C2orf83Q53S99 150 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 HIST2H2BDQ6DRA6 164 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 SLC25A24Q6NUK1 477 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 ASB13Q8WXK3 278 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 OR4C12Q96R67 309 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 RNF126Q9BV68 326 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 PSENENQ9NZ42 101 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 OR5AC2Q9NZP5 309 aa9.28□□□□□ -0.92
COMMD9-208ENST00000533643 TRAV14DV4A0A0A6YYC5 116 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 C15orf62A8K5M9 175 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 H3BP45 60 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 DEDDO75618 318 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 OR2J3O76001 311 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 NDUFB8O95169 186 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 RLN2P04090 185 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 HIST1H1BP16401 226 aaKnown RBP9.27□□□□□ -0.93
COMMD9-208ENST00000533643 NPY1RP25929 384 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 ATP5IP56385 69 aaPredicted RBP9.27□□□□□ -0.93
COMMD9-208ENST00000533643 TPPP2P59282 170 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 TAS2R30P59541 319 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 RHOGP84095 191 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 CD83Q01151 205 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 DEFA5Q01523 94 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 Q5BKY6 102 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 TMEM65Q6PI78 240 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 C11orf44Q8N8P7 122 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 NECAP1Q8NC96 275 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 SLC24A4Q8NFF2 622 aa9.27□□□□□ -0.93
COMMD9-208ENST00000533643 OR4X2Q8NGF9 303 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms