RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ZNF418Q8TF45 676 aaPredicted RBP0.28□□□□□ -2.36
ATM-220ENST00000533526 CMTM5Q96DZ9 223 aa0.28□□□□□ -2.36
ATM-220ENST00000533526 SCGB3A1Q96QR1 104 aa0.28□□□□□ -2.36
ATM-220ENST00000533526 MAP1LC3AQ9H492 121 aa0.28□□□□□ -2.36
ATM-220ENST00000533526 RIC1Q4ADV7 1423 aa0.28□□□□□ -2.37
ATM-220ENST00000533526 ANAPC1Q9H1A4 1944 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 GOLGA8KD6RF30 607 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 OR2T1O43869 369 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 OR1I1O60431 355 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 RPL12P30050 165 aaKnown RBP0.27□□□□□ -2.37
ATM-220ENST00000533526 MAP3K7CLP57077 242 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 RAB4BP61018 213 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 PDE6HQ13956 83 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 GRK1Q15835 563 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 SPANXN3Q5MJ09 141 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 GDF5OSQ5U4N7 250 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 FAM9CQ8IZT9 166 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 LINC00311Q8N616 119 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 PIGXQ8TBF5 258 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 CNBD2Q96M20 576 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 SLC50A1Q9BRV3 221 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 IMP3Q9NV31 184 aaKnown RBP0.27□□□□□ -2.37
ATM-220ENST00000533526 C3orf18Q9UK00 162 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 ADGRB2O60241 1585 aa0.27□□□□□ -2.37
ATM-220ENST00000533526 TRBV20OR9-2A0A075B6H5 130 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 IGKV1D-42A0A075B6H8 117 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 A0A0J9YY10 115 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 A0A1B0GX78 115 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 CLDN25C9JDP6 229 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 M0R2N4 97 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 CTSDP07339 412 aaPredicted RBP0.26□□□□□ -2.37
ATM-220ENST00000533526 COX6A1P12074 109 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 FKBP2P26885 142 aaKnown RBP0.26□□□□□ -2.37
ATM-220ENST00000533526 ZNF93P35789 620 aaPredicted RBP0.26□□□□□ -2.37
ATM-220ENST00000533526 UBE2G2P60604 165 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 C1orf195Q5TG92 126 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 AADACL3Q5VUY0 350 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 RPL22L1Q6P5R6 122 aaKnown RBP0.26□□□□□ -2.37
ATM-220ENST00000533526 SPATA8Q6RVD6 105 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 LRRN1Q6UXK5 716 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 Q6ZS49 121 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 SBSPONQ8IVN8 264 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 IQCF2Q8IXL9 164 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 AMELYQ99218 206 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 DERL1Q9BUN8 251 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 MIXL1Q9H2W2 232 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 TOPBP1Q92547 1522 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 HEATR5AQ86XA9 2040 aa0.26□□□□□ -2.37
ATM-220ENST00000533526 A0A0D9SG52 128 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 C2orf70A6NJV1 201 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 ACOX3O15254 700 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 OCM2P0CE71 109 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 MIFP14174 115 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BOP23527 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 CASQ1P31415 396 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BBP33778 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BDP58876 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 NAA20P61599 178 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BCP62807 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 RHOGP84095 191 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 MLLT11Q13015 90 aaPredicted RBP0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST2H2BEQ16778 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.25□□□□□ -2.37
ATM-220ENST00000533526 CLVS2Q5SYC1 327 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 OGFRL1Q5TC84 451 aaPredicted RBP0.25□□□□□ -2.37
ATM-220ENST00000533526 OOSP2Q86WS3 158 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 OR4E2Q8NGC2 313 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 OR2T4Q8NH00 348 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 PFN4Q8NHR9 129 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 MRPL30Q8TCC3 161 aaKnown RBP0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BHQ93079 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 ATP6V1G3Q96LB4 118 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BNQ99877 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 HIST1H2BMQ99879 126 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 GINS4Q9BRT9 223 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 WDR61Q9GZS3 305 aaKnown RBP0.25□□□□□ -2.37
ATM-220ENST00000533526 RP1P56715 2156 aa0.25□□□□□ -2.37
ATM-220ENST00000533526 MAST2Q6P0Q8 1798 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 A0A1W2PPM0 123 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 KCNK1O00180 336 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 CXCR6O00574 342 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 INE1O15225 51 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 BAALC-AS2P0C853 105 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 COX5BP10606 129 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 SPI1P17947 270 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 SKP1P63208 163 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 SRSF6Q13247 344 aaKnown RBP0.24□□□□□ -2.37
ATM-220ENST00000533526 KISS1Q15726 138 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 KCNJ8Q15842 424 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 DPPA3Q6W0C5 159 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 Q6ZQT0 140 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 LRRC25Q8N386 305 aaPredicted RBP0.24□□□□□ -2.37
ATM-220ENST00000533526 Q8N6K4 173 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 ULBP3Q9BZM4 244 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 CISHQ9NSE2 258 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 FGFR1OP2Q9NVK5 253 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 RASL12Q9NYN1 266 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 PEAK1Q9H792 1746 aa0.24□□□□□ -2.37
ATM-220ENST00000533526 PIK3R4Q99570 1358 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms