RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 CTRB1P17538 263 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 HTR2BP41595 481 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 RPP30P78346 268 aaKnown RBP11.1□□□□□ -0.63
HIF3A-215ENST00000533145 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 C19orf54Q5BKX5 351 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 CTRB2Q6GPI1 263 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 ZNF546Q86UE3 836 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 GRPEL2Q8TAA5 225 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 HYLS1Q96M11 299 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 ZNF702PQ9H963 129 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 LYRM2Q9NU23 88 aaPredicted RBP11.1□□□□□ -0.63
HIF3A-215ENST00000533145 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
HIF3A-215ENST00000533145 AP4M1O00189 453 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
HIF3A-215ENST00000533145 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 C9orf152Q5JTZ5 239 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 TMEM14EPQ6UXP3 125 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 NOXA1Q86UR1 476 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
HIF3A-215ENST00000533145 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 TNFSF18Q9UNG2 199 aa11.09□□□□□ -0.63
HIF3A-215ENST00000533145 STRAPQ9Y3F4 350 aaKnown RBP11.09□□□□□ -0.63
HIF3A-215ENST00000533145 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
HIF3A-215ENST00000533145 BRI3O95415 125 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
HIF3A-215ENST00000533145 AREGP15514 252 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 SNCAP37840 140 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 ZFP69Q49AA0 526 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 SPANXN5Q5MJ07 72 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 TMEM252Q8N6L7 170 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 OR1L6Q8NGR2 347 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 ABHD5Q8WTS1 349 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 DCUN1D4Q92564 292 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 AQP10Q96PS8 301 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 P2RX4Q99571 388 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
HIF3A-215ENST00000533145 FXYD6-FXYD2A0A087WZ82 144 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 FAM24AA6NFZ4 105 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 PMS2P5A8MQ11 134 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 FBXO24O75426 580 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 IFNA10P01566 189 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 CRYBA1P05813 215 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 HKR1P10072 659 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 NPY1RP25929 384 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
HIF3A-215ENST00000533145 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 Q6ZSV7 163 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 STPG2Q8N412 459 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 FAM110DQ8TAY7 271 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-215ENST00000533145 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 OR4C12Q96R67 309 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
HIF3A-215ENST00000533145 F11RQ9Y624 299 aaKnown RBP11.07□□□□□ -0.64
HIF3A-215ENST00000533145 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 RNF222A6NCQ9 220 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 RPL12P30050 165 aaKnown RBP11.06□□□□□ -0.64
HIF3A-215ENST00000533145 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-215ENST00000533145 CAV2P51636 162 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 RAB11AP62491 216 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 CFHR3Q02985 330 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 BAXQ07812 192 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 INO80EQ8NBZ0 244 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-215ENST00000533145 GON7Q9BXV9 100 aa11.06□□□□□ -0.64
HIF3A-215ENST00000533145 IGSF23A1L1A6 192 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 G3V318 75 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 H3BP45 60 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 NDUFA7O95182 113 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 REG1AP05451 166 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 APELAP0DMC3 54 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 SULT1A1P50225 295 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 EWSR1Q01844 656 aaKnown RBP eCLIP11.05□□□□□ -0.64
HIF3A-215ENST00000533145 OR2F1Q13607 317 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 ZNF345Q14585 488 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 RNASEH2CQ8TDP1 164 aaKnown RBP11.05□□□□□ -0.64
HIF3A-215ENST00000533145 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 MFFQ9GZY8 342 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 SERTAD4Q9NUC0 356 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 HSPB11Q9Y547 144 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 DNHD1Q96M86 4753 aa11.05□□□□□ -0.64
HIF3A-215ENST00000533145 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 A0A0D9SG52 128 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 H3BUA1 57 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 CORTO00230 105 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 ARPC5O15511 151 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 CYB5BO43169 146 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 OR8U8P0C7N1 319 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 METTL15P1P0C7V9 234 aa11.04□□□□□ -0.64
HIF3A-215ENST00000533145 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
HIF3A-215ENST00000533145 MFAP2P55001 183 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms