RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 HTN3P15516 51 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 C10orf55Q5SWW7 151 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 SMIM8Q96KF7 97 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 NABP2Q9BQ15 211 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 OR51M1Q9H341 326 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 PRTN3P24158 256 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 TSPOP30536 169 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 IFITM3Q01628 133 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 GTSCR1Q86UQ5 136 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 TEX45Q8NA69 505 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 KLHL30-AS1Q8NEE0 82 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 COQ2Q96H96 371 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 SLC35B3Q9H1N7 401 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.55□□□□□ -1.369e-7■■■□□ 18
CTNND1-230ENST00000532245 CADP27708 2225 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 MYOD1P15172 320 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 TMEM42Q69YG0 159 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 ZNF324BQ6AW86 544 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-230ENST00000532245 DUX4L9Q6RFH8 374 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-230ENST00000532245 CYP2G1PQ6ZSU1 146 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 FAM89BQ8N5H3 189 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 SLC2A8Q9NY64 477 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 ZNF581Q9P0T4 197 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 TNFSF18Q9UNG2 199 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 MED13LQ71F56 2210 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 MAS1LP35410 378 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 BATFQ16520 125 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 LHFPL4Q7Z7J7 247 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 ZNF843Q8N446 348 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 VAX2Q9UIW0 290 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 TBL2Q9Y4P3 447 aaKnown RBP6.55□□□□□ -1.36
CTNND1-230ENST00000532245 SCN8AQ9UQD0 1980 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 IGHV2-70DA0A0C4DH43 119 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 RAB19A4D1S5 217 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 UCP1P25874 307 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 ZNF585BQ52M93 769 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 LDLRAD2Q5SZI1 272 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 LCNL1Q6ZST4 164 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 GFI1Q99684 422 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 RTBDNQ9BSG5 229 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-230ENST00000532245 IGF2RP11717 2491 aa6.55□□□□□ -1.36
CTNND1-230ENST00000532245 IGHV1-69DA0A0B4J2H0 117 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 IGHV1-69P01742 117 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 IGFBP2P18065 325 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 SERF2P84101 59 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 ZNRD1Q9P1U0 126 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 FOXI3A8MTJ6 420 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-230ENST00000532245 OOSP1A8MZH6 123 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 GATA2P23769 480 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-230ENST00000532245 RND3P61587 244 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 Q6P435 159 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 OR10W1Q8NGF6 305 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 OR2D3Q8NGH3 330 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 PHYHIPLQ96FC7 376 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 SRD5A3Q9H8P0 318 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 DLK1P80370 383 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 SLC25A48Q6ZT89 311 aaKnown RBP6.54□□□□□ -1.36
CTNND1-230ENST00000532245 DOPEY2Q9Y3R5 2298 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 ELOA3CA0A087WX78 387 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-230ENST00000532245 PDE6DO43924 150 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 DKK1O94907 266 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 CGAP01215 116 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 CSN3P07498 182 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 CD300CQ08708 224 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 SRSF7Q16629 238 aaKnown RBP eCLIP6.54□□□□□ -1.361e-6■■□□□ 13.9
CTNND1-230ENST00000532245 TMEM88Q6PEY1 159 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 HSPB7Q9UBY9 170 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 PTPN13Q12923 2485 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 TMEM189A5PLL7 270 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 MFSD2BA6NFX1 497 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 C15orf61A6NNL5 157 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 TEX38Q6PEX7 206 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 STHQ8IWL8 128 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 NHLRC2Q8NBF2 726 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 RNF114Q9Y508 228 aa6.54□□□□□ -1.36
CTNND1-230ENST00000532245 ALPK3Q96L96 1907 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 TRAV14DV4A0A0A6YYC5 116 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 CD8AP01732 235 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 SEC11BP0C7V7 166 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 ARL14EPLP0DKL9 152 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 ZP3P21754 424 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 UBE2E1P51965 193 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 KLF17Q5JT82 389 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 PQLC2Q6ZP29 291 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 RSPO3Q9BXY4 272 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 FBLN5Q9UBX5 448 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 IGHV4-30-2A0A087WSY4 118 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 TCF21O43680 179 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 MFAP2P55001 183 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 ATP5IP56385 69 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-230ENST00000532245 C15orf32Q32M92 178 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 PIP4P2Q8N4L2 257 aa6.53□□□□□ -1.36
CTNND1-230ENST00000532245 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms