RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	KCNS1	Q96KK3	526 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	TRIB3	Q96RU7	358 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PAXX	Q9BUH6	204 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	MED28	Q9H204	178 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZNF702P	Q9H963	129 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	CCL28	Q9NRJ3	127 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	KCNIP2	Q9NS61	270 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	MED31	Q9Y3C7	131 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ANKRD31	Q8N7Z5	1873 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZNF106	Q9H2Y7	1883 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	RPL37AP8	A6NKH3	93 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	IFITM5	A6NNB3	132 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZNF705G	A8MUZ8	300 aa	Predicted RBP	3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PIR	O00625	290 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	RAMP2	O60895	175 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	OR2H2	O95918	312 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	NRAS	P01111	189 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	OR4Q2	P0C623	313 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PPP1CC	P36873	323 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	LOXL1	Q08397	574 aa	Predicted RBP	3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	UBE2NL	Q5JXB2	153 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZNF788	Q6ZQV5	615 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	SHISA6	Q6ZSJ9	500 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	TMEM252	Q8N6L7	170 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	OR4K5	Q8NGD3	323 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	TWIST2	Q8WVJ9	160 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	MGLL	Q99685	303 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	SOST	Q9BQB4	213 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ANAPC13	Q9BS18	74 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PARP11	Q9NR21	331 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	MARCO	Q9UEW3	520 aa	Predicted RBP	3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	HS3ST2	Q9Y278	367 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	FIS1	Q9Y3D6	152 aa		3.98	□□□□□ -1.77
ECHDC1-222	ENST00000531967	MIA3	Q5JRA6	1907 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZFC3H1	O60293	1989 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	COL1A2	P08123	1366 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	IMPA1	P29218	277 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PSMB3	P49720	205 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	GRB2	P62993	217 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	HERVK_113	P63121	156 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	FHL1	Q13642	323 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ENDOG	Q14249	297 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	RASL11A	Q6T310	242 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZNF575	Q86XF7	245 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PRIMA1	Q86XR5	153 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	FER1L6-AS1	Q8NA97	138 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	CSNK1G2-AS1	Q8NCQ2	148 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	OR52P1P	Q8NH57	321 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	IGF2BP2-AS1	Q96M15	143 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	NMNAT3	Q96T66	252 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ADAT1	Q9BUB4	502 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	CYSLTR1	Q9Y271	337 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	COQ4	Q9Y3A0	265 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ADAMTSL1	Q8N6G6	1762 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PLXND1	Q9Y4D7	1925 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	LTBP4	Q8N2S1	1624 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	IGHV4-30-2	A0A087WSY4	118 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	TRAV38-1	A0A0B4J264	116 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	TRAV4	A0A0B4J268	109 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	BBIP1	A8MTZ0	92 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PRAC2	D3DTV9	90 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	PROP1	O75360	226 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	CXorf1	O96002	111 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	ZNF19	P17023	458 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	THBS3	P49746	956 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	RPS25	P62851	125 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	STPG1	Q5TH74	334 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	GTF2H5	Q6ZYL4	71 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	NUP35	Q8NFH5	326 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	VN1R17P	Q8TDU5	208 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	DDB2	Q92466	427 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	FRZB	Q92765	325 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	SAMD10	Q9BYL1	202 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	IFI27L2	Q9H2X8	130 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	OR5AC2	Q9NZP5	309 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	DPM3	Q9P2X0	92 aa		3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	RPUSD1	Q9UJJ7	312 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-222	ENST00000531967	THSD7A	Q9UPZ6	1657 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	SPAAR	A0A1B0GVQ0	90 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	TMEM250	H0YL14	139 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967		M0R1X1	148 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	TBL1X	O60907	577 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	IGHV3-48	P01763	117 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	CTSE	P14091	401 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	ADCYAP1	P18509	176 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	DRAM1	Q8N682	238 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	C5orf17	Q8NAS9	161 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	SLC25A40	Q8TBP6	338 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	HIST1H2BL	Q99880	126 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	JPT2	Q9H910	190 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	ZNF222	Q9UK12	451 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	UBR3	Q6ZT12	1888 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967		A0A0D9SG52	128 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	CD300LB	A8K4G0	201 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	C4orf51	C9J302	202 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	LMX1B	O60663	402 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	CTSD	P07339	412 aa	Predicted RBP	3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	PPIB	P23284	216 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	NFYB	P25208	207 aa		3.96	□□□□□ -1.78
ECHDC1-222	ENST00000531967	LMO2	P25791	158 aa		3.96	□□□□□ -1.78

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