RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	IGFBP3	P17936	291 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	RAB5A	P20339	215 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	ACTB	P60709	375 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	ST3GAL4	Q11206	333 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	GRK1	Q15835	563 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	C17orf58	Q2M2W7	97 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	FFAR4	Q5NUL3	377 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867		Q6ZN92	141 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	GTSCR1	Q86UQ5	136 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	PUSL1	Q8N0Z8	303 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	OR8B12	Q8NGG6	310 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	SCGB3A2	Q96PL1	93 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	LINC00574	Q9H8X3	128 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	AMBN	Q9NP70	447 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	DNAJC27	Q9NZQ0	273 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	ENPP4	Q9Y6X5	453 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	UBR4	Q5T4S7	5183 aa		4.17	□□□□□ -1.74
PUM1-222	ENST00000531867	TRGV10	A0A0A0MS01	117 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	IGHV1-3	A0A0C4DH29	117 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	FAM183A	A6NL82	134 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	NCBP2L	A6PVI3	153 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	FAM220BP	B1ANY3	271 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867		G3V318	75 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	SMKR1	H3BMG3	65 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	GPX5	O75715	221 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	CNIH1	O95406	144 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	HAND1	O96004	215 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	NRAS	P01111	189 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	RBMY1C	P0DJD4	496 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	RPL29	P47914	159 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	HCCS	P53701	268 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	PAFAH1B2	P68402	229 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF146	Q15072	292 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	SMUG1	Q53HV7	270 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	PDZD11	Q5EBL8	140 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	ZNF684	Q5T5D7	378 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	TRAPPC6B	Q86SZ2	158 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	ENTHD1	Q8IYW4	607 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	OR52L1	Q8NGH7	329 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	OR5D18	Q8NGL1	313 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	OR2T10	Q8NGZ9	312 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	HAVCR2	Q8TDQ0	301 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	FLYWCH2	Q96CP2	140 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	CEP19	Q96LK0	163 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	RASL11B	Q9BPW5	248 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	AGMAT	Q9BSE5	352 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	CHST6	Q9GZX3	395 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	FGFR1OP2	Q9NVK5	253 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	BABAM2	Q9NXR7	383 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	LRRC42	Q9Y546	428 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	WSB1	Q9Y6I7	421 aa		4.16	□□□□□ -1.74
PUM1-222	ENST00000531867	IGHV3-38	A0A0C4DH36	116 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867		A0A0J9YWU9	116 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	FUOM	A2VDF0	154 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867		A6NDN8	102 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	ZNF729	A6NN14	1252 aa	Predicted RBP	4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	GAS8-AS1	O95177	125 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	HPRT1	P00492	218 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	MOS	P00540	346 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	CSN2	P05814	226 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	GYPB	P06028	91 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	SPI1	P17947	270 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	GABRR1	P24046	479 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	ALDH3B2	P48448	385 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	HSPA13	P48723	471 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	RIDA	P52758	137 aa	Known RBP	4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	CRIP2	P52943	208 aa	Predicted RBP	4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	SUB1	P53999	127 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	CDC42	P60953	191 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	RAB14	P61106	215 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	TSPAN31	Q12999	210 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	POU2AF1	Q16633	256 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	LCN12	Q6JVE5	192 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	ACOT7L	Q6ZUV0	252 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	ANGPTL5	Q86XS5	388 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867		Q8N402	240 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	ADTRP	Q96IZ2	230 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	RARRES2	Q99969	163 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	MRPS26	Q9BYN8	205 aa	Known RBP	4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	IFT46	Q9NQC8	304 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	FAM206A	Q9NX38	181 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	GLS2	Q9UI32	602 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	PSG11	Q9UQ72	335 aa		4.15	□□□□□ -1.75
PUM1-222	ENST00000531867	IGKV1-27	A0A075B6S5	117 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	TEX48	A0A1B0GUV7	120 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	ODAM	A1E959	279 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	IZUMO1R	A6ND01	250 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	DHRS7C	A6NNS2	312 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	RTL8C	O15255	209 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	ATP8B1	O43520	1251 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	DENR	O43583	198 aa	Known RBP	4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	ENTPD6	O75354	484 aa		4.14	□□□□□ -1.75
PUM1-222	ENST00000531867	DHRS3	O75911	302 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms