RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 HIST1H2BDP58876 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST1H2BCP62807 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST2H2BEQ16778 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.23□□□□□ -2.05
USP47-211ENST00000531513 AKR1C8PQ5T2L2 129 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 STX19Q8N4C7 294 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 OR11H6Q8NGC7 330 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 OR13C4Q8NGS5 318 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST1H2BHQ93079 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST1H2BNQ99877 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 HIST1H2BMQ99879 126 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 CCDC90BQ9GZT6 254 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 PARVBQ9HBI1 364 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 SPANXA1Q9NS26 97 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 TAS2R7Q9NYW3 318 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 TP73-AS1Q9UF72 201 aa2.23□□□□□ -2.05
USP47-211ENST00000531513 ATG2BQ96BY7 2078 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 PBRM1Q86U86 1689 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 TRAV9-1A0A075B6T8 112 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 hCG_1818297A0A087WSY0 165 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 TRGV5A0A0B4J1U4 118 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 IGKV1D-43A0A0B4J1Z2 117 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 A0A0J9YW62 118 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 A8MT66 165 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 ODF3BA8MYP8 253 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 E7EQL1 145 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 TSTD3H0UI37 97 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 AIPO00170 330 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 S1PR2O95136 353 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 C1QAP02745 245 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 C8GP07360 202 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 SMIM10L2AP0DMW4 78 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 SMIM10L2BP0DMW5 78 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 HLA-DMBP28068 263 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 ALDH3A1P30838 453 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
USP47-211ENST00000531513 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 AADACL3Q5VUY0 350 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 RPL22L1Q6P5R6 122 aaKnown RBP2.22□□□□□ -2.05
USP47-211ENST00000531513 GOLT1AQ6ZVE7 132 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 GRINAQ7Z429 371 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 LHFPL1Q86WI0 220 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 C12orf45Q8N5I9 185 aaPredicted RBP2.22□□□□□ -2.05
USP47-211ENST00000531513 C12orf29Q8N999 325 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 ZNF439Q8NDP4 499 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 GPER1Q99527 375 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 GINS3Q9BRX5 216 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 C6orf62Q9GZU0 229 aaPredicted RBP2.22□□□□□ -2.05
USP47-211ENST00000531513 PSORS1C2Q9UIG4 136 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 UTP11Q9Y3A2 253 aaKnown RBP2.22□□□□□ -2.05
USP47-211ENST00000531513 CACNA1DQ01668 2161 aa2.22□□□□□ -2.05
USP47-211ENST00000531513 FUOMA2VDF0 154 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 GGT3PA6NGU5 568 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 SYNMO15061 1565 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 TFPTP0C1Z6 253 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 NBEAP1P0C6P0 100 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 RPL18Q07020 188 aaKnown RBP2.21□□□□□ -2.06
USP47-211ENST00000531513 RALGAPA2Q2PPJ7 1873 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 IBA57Q5T440 356 aaKnown RBP2.21□□□□□ -2.06
USP47-211ENST00000531513 SMIM20Q8N5G0 67 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 TMEM35BQ8NCS4 154 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 SLC7A6Q92536 515 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 GPR146Q96CH1 333 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 C20orf166-AS1Q96NR2 134 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 IMMP2LQ96T52 175 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 DERL1Q9BUN8 251 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 OR8D2Q9GZM6 311 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 SH3BGRL3Q9H299 93 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 MIXL1Q9H2W2 232 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 YTHDC2Q9H6S0 1430 aaKnown RBP2.21□□□□□ -2.06
USP47-211ENST00000531513 TUBA4BQ9H853 241 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 LYRM2Q9NU23 88 aaPredicted RBP2.21□□□□□ -2.06
USP47-211ENST00000531513 NDUFAF1Q9Y375 327 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 TONSLQ96HA7 1378 aa2.21□□□□□ -2.06
USP47-211ENST00000531513 DENND4BO75064 1496 aaPredicted RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 TRAPPC13A5PLN9 417 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 G3V2T6 193 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 GPR31O00270 319 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 ZNF73O43830 326 aaPredicted RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 NDUFC2O95298 119 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 IFNA10P01566 189 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 IGHV3-7P01780 117 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 HMGN1P05114 100 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 LGALS1P09382 135 aaKnown RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 SPI1P17947 270 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 GZMHP20718 246 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 PPIBP23284 216 aaKnown RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 PSMB8P28062 276 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 ERP29P30040 261 aaKnown RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 PHBP35232 272 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 TPI1P60174 286 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 MEF2BQ02080 365 aaPredicted RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 FOXF1Q12946 379 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 TAF9Q16594 264 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 ZNF705AQ6ZN79 300 aaPredicted RBP2.2□□□□□ -2.06
USP47-211ENST00000531513 Q6ZS52 159 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 SLC35E3Q7Z769 313 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 DYNAPQ8N1N2 210 aa2.2□□□□□ -2.06
USP47-211ENST00000531513 SKA2Q8WVK7 121 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms