RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MLLT11Q13015 90 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-206ENST00000531430 EIF4EBP1Q13541 118 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-206ENST00000531430 IRF3Q14653 427 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 RCN1Q15293 331 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 PVRIGQ6DKI7 326 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 UBE2DNLQ8IWF7 75 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 TSPAN14Q8NG11 270 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 PINX1Q96BK5 328 aaKnown RBP6.72□□□□□ -1.33
NEDD8-206ENST00000531430 SRSF8Q9BRL6 282 aaKnown RBP6.72□□□□□ -1.33
NEDD8-206ENST00000531430 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 OR51B2Q9Y5P1 312 aa6.72□□□□□ -1.33
NEDD8-206ENST00000531430 F11RQ9Y624 299 aaKnown RBP6.72□□□□□ -1.33
NEDD8-206ENST00000531430 DEFB131BA0A096LNP1 70 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 TRAV1-2A0A0B4J238 106 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 C15orf61A6NNL5 157 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 RTL8CO15255 209 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 DFFBO76075 338 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 KRASP01116 189 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 IFNA21P01568 189 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 IFNA17P01571 189 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 P0DMU3 169 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 LPAR6P43657 344 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 MFAP4P55083 255 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 ZNF773Q6PK81 442 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 HSD17B13Q7Z5P4 300 aaPredicted RBP6.71□□□□□ -1.34
NEDD8-206ENST00000531430 TPRA1Q86W33 373 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 TMEM17Q86X19 198 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 POM121L12Q8N7R1 296 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 BEST4Q8NFU0 473 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 LSM10Q969L4 123 aaKnown RBP6.71□□□□□ -1.34
NEDD8-206ENST00000531430 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 MS4A6AQ9H2W1 248 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 VCXQ9H320 206 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 PLA2G2EQ9NZK7 142 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
NEDD8-206ENST00000531430 TRAV18A0A075B6X5 111 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-206ENST00000531430 K7EIM0 57 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 SSX5O60225 188 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 GNG7O60262 68 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 PPYP01298 95 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 APOHP02749 345 aaPredicted RBP6.7□□□□□ -1.34
NEDD8-206ENST00000531430 NPY1RP25929 384 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 G6PCP35575 357 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 FAM90A2PQ658T7 463 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 THOC7Q6I9Y2 204 aaKnown RBP6.7□□□□□ -1.34
NEDD8-206ENST00000531430 C22orf42Q6IC83 251 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 ZNF575Q86XF7 245 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 LILRB2Q8N423 598 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 FAM24BQ8N5W8 94 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 Q8NAQ8 132 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 DUSP18Q8NEJ0 188 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 ST8SIA2Q92186 375 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 MOB3AQ96BX8 217 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 TMEM56Q96MV1 263 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 GINS3Q9BRX5 216 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 NDUFAF3Q9BU61 184 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 PLEKHA2Q9HB19 425 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 NDUFA4L2Q9NRX3 87 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 DAPK2Q9UIK4 370 aa6.7□□□□□ -1.34
NEDD8-206ENST00000531430 DNAH17Q9UFH2 4485 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 AGRNO00468 2067 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
NEDD8-206ENST00000531430 RBFOX2O43251 390 aaKnown RBP eCLIP6.69□□□□□ -1.34
NEDD8-206ENST00000531430 MIFP14174 115 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 HERV-K104P61576 105 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 ACTL10Q5JWF8 245 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 TOMM20LQ6UXN7 152 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 ZNF818PQ6ZRF7 136 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 STXBP6Q8NFX7 210 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 DGCR14Q96DF8 476 aaKnown RBP6.69□□□□□ -1.34
NEDD8-206ENST00000531430 RNF126Q9BV68 326 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 SCRT1Q9BWW7 348 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 NXF2Q9GZY0 626 aaKnown RBP6.69□□□□□ -1.34
NEDD8-206ENST00000531430 DUSP21Q9H596 190 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 TBC1D24Q9ULP9 559 aa6.69□□□□□ -1.34
NEDD8-206ENST00000531430 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
NEDD8-206ENST00000531430 DNAH2Q9P225 4427 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 MEIS3P1A6NDR6 274 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 MARCH11A6NNE9 402 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 EBAG9O00559 213 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 MT-CO2P00403 227 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 RLN1P04808 185 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 ZNF688P0C7X2 276 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 EMP1P54849 157 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 POU2AF1Q16633 256 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 C12orf74Q32Q52 190 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 SOHLH1Q5JUK2 328 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 OGFRL1Q5TC84 451 aaPredicted RBP6.68□□□□□ -1.34
NEDD8-206ENST00000531430 UBE2UQ5VVX9 321 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 ATP6V0BQ99437 205 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 FKBP11Q9NYL4 201 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
NEDD8-206ENST00000531430 RRP15Q9Y3B9 282 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms