RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 MYCNOSP40205 109 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 SPCS3P61009 180 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 RHOGP84095 191 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 WT1-ASQ06250 92 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 C18orf65Q6ZTR6 163 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 NECAP1Q8NC96 275 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 OR1L6Q8NGR2 347 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 PLEKHA3Q9HB20 300 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 I3L521 148 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 PF4P02776 101 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 SLC25A6P12236 298 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
CCS-206ENST00000530961 SMCO1Q147U7 214 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 FANCD2OSQ96PS1 177 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 KRTAP17-1Q9BYP8 105 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 GNB4Q9HAV0 340 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 THYN1Q9P016 225 aa11.86□□□□□ -0.51
CCS-206ENST00000530961 CCL24O00175 119 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 PRH1P02810 166 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 REG1AP05451 166 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
CCS-206ENST00000530961 ATP5G2Q06055 141 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 OR2C3Q8N628 320 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 ENY2Q9NPA8 101 aa11.85□□□□□ -0.51
CCS-206ENST00000530961 F11RQ9Y624 299 aaKnown RBP11.85□□□□□ -0.51
CCS-206ENST00000530961 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 OR2J3O76001 311 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 IFNA21P01568 189 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 PLET1Q6UQ28 207 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 ZNF114Q8NC26 417 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 WFDC9Q8NEX5 89 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 OR1N2Q8NGR9 330 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 OR5B12Q96R08 314 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 P2RX4Q99571 388 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 FBXL7Q9UJT9 491 aa11.84□□□□□ -0.51
CCS-206ENST00000530961 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 HSPB1P04792 205 aaKnown RBP11.83□□□□□ -0.52
CCS-206ENST00000530961 IL5P05113 134 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 HOXB5P09067 269 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 SNCAP37840 140 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 HOXA1P49639 335 aaPredicted RBP11.83□□□□□ -0.52
CCS-206ENST00000530961 C15orf32Q32M92 178 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 GGNBP1Q5YKI7 109 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 SLC25A24Q6NUK1 477 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 OR11H1Q8NG94 326 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 ZNF431Q8TF32 576 aaPredicted RBP11.83□□□□□ -0.52
CCS-206ENST00000530961 DPF1Q92782 380 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
CCS-206ENST00000530961 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
CCS-206ENST00000530961 PITX3O75364 302 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCS-206ENST00000530961 TNFRSF9Q07011 255 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 ZNF616Q08AN1 781 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 FHL3Q13643 280 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 ETV3LQ6ZN32 361 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 C19orf35Q6ZS72 473 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 OR1S1Q8NH92 325 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 MARVELD1Q9BSK0 173 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 GPN1Q9HCN4 374 aaPredicted RBP11.82□□□□□ -0.52
CCS-206ENST00000530961 HSPB7Q9UBY9 170 aa11.82□□□□□ -0.52
CCS-206ENST00000530961 CEBPZOSA8MTT3 80 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 FAM90A26D6RGX4 464 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 INMT-MINDY4F8WBC2 141 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 LINC01619G3V211 115 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 PRAF2O60831 178 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 NDUFB8O95169 186 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 OR8U8P0C7N1 319 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 EXOSC2Q13868 293 aaKnown RBP11.81□□□□□ -0.52
CCS-206ENST00000530961 SPINK9Q5DT21 86 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 LINC00482Q8N8I6 264 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 HIPK2Q9H2X6 1198 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 PEF1Q9UBV8 284 aaKnown RBP11.81□□□□□ -0.52
CCS-206ENST00000530961 DMRT1Q9Y5R6 373 aa11.81□□□□□ -0.52
CCS-206ENST00000530961 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.8□□□□□ -0.52
CCS-206ENST00000530961 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 ADAP1O75689 374 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 CD33P20138 364 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 ZP3P21754 424 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 HTR2BP41595 481 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 C12orf45Q8N5I9 185 aaPredicted RBP11.8□□□□□ -0.52
CCS-206ENST00000530961 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 DUX3Q96PT4 197 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 SEC22CQ9BRL7 303 aa11.8□□□□□ -0.52
CCS-206ENST00000530961 HEYLQ9NQ87 328 aaPredicted RBP11.8□□□□□ -0.52
CCS-206ENST00000530961 SNRPGP15A8MWD9 76 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 CORTO00230 105 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 MED6O75586 246 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms