RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 FAM71F2Q6NXP2 309 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 FAM131AQ6UXB0 335 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 CDH26Q8IXH8 852 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 ZFP41Q8N8Y5 198 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF555Q8NEP9 628 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 NPBQ8NG41 125 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 MRPL30Q8TCC3 161 aaKnown RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 CASTOR1Q8WTX7 329 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 GALMQ96C23 342 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 RDH12Q96NR8 316 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 YPEL2Q96QA6 119 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 TOLLIPQ9H0E2 274 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 Q9HAA7 133 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 ABRACLQ9P1F3 81 aa4.87□□□□□ -1.63
CSDE1-213ENST00000530784 DIMT1Q9UNQ2 313 aaKnown RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 EXOSC1Q9Y3B2 195 aaKnown RBP4.87□□□□□ -1.63
CSDE1-213ENST00000530784 OR5H14A6NHG9 310 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 H7C2Y5 167 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 WBP4O75554 376 aaKnown RBP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 IGHV3-11P01762 117 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 CD40LGP29965 261 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 TPPP2P59282 170 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 TAS2R43P59537 309 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 LYZP61626 148 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 RPS11P62280 158 aaKnown RBP eCLIP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 TMEM267Q0VDI3 215 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 HMGN3Q15651 99 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 LRRC36Q1X8D7 754 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 CNPY1Q3B7I2 92 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 LY6G6FQ5SQ64 297 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 ZFAND6Q6FIF0 208 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF600Q6ZNG1 722 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 LYPD6Q86Y78 171 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 SGPP2Q8IWX5 399 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 C10orf67Q8IYJ2 551 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 OR4A16Q8NH70 328 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 IL1F10Q8WWZ1 152 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 FLYWCH2Q96CP2 140 aaKnown RBP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 TMEM80Q96HE8 168 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 CYYR1Q96J86 154 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 PGLYRP3Q96LB9 341 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 DERL3Q96Q80 235 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 SLC29A1Q99808 456 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 TM2D3Q9BRN9 247 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 YTHDF1Q9BYJ9 559 aaKnown RBP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 IFI27L2Q9H2X8 130 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 FBXL15Q9H469 300 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 SMPD3Q9NY59 655 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-213ENST00000530784 PIPOXQ9P0Z9 390 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 GHRLQ9UBU3 117 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 CLEC2DQ9UHP7 191 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 LRRC42Q9Y546 428 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 RYR2Q92736 4967 aa4.86□□□□□ -1.63
CSDE1-213ENST00000530784 PNMA8CA0A1B0GUJ8 204 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 RAB29O14966 203 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 ARPC1BO15143 372 aaKnown RBP4.85□□□□□ -1.63
CSDE1-213ENST00000530784 ATP6V1G1O75348 118 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 RBBP9O75884 186 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 BAG2O95816 211 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 CA2P00918 260 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 HSPB1P04792 205 aaKnown RBP4.85□□□□□ -1.63
CSDE1-213ENST00000530784 UBBP0CG47 229 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 MAPK3P27361 379 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-213ENST00000530784 ACTBL2Q562R1 376 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 RPL39P5Q59GN2 51 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 CD200R1LQ6Q8B3 271 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 UNQ5815/PRO19632Q6UWF5 114 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 PPP1R27Q86WC6 154 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 LFNGQ8NES3 379 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 THRSPQ92748 146 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 MRPL53Q96EL3 112 aaKnown RBP4.85□□□□□ -1.63
CSDE1-213ENST00000530784 CLCC1Q96S66 551 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 UQCC2Q9BRT2 126 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 FAM103A1Q9BTL3 118 aaKnown RBP4.85□□□□□ -1.63
CSDE1-213ENST00000530784 METTL1Q9UBP6 276 aaKnown RBP4.85□□□□□ -1.63
CSDE1-213ENST00000530784 Q9UF83 564 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 WASHC3Q9Y3C0 194 aa4.85□□□□□ -1.63
CSDE1-213ENST00000530784 H0YJW9 148 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 FCN1O00602 326 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 MYL12BO14950 172 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 SLC22A1O15245 554 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 IGLV1-51P01701 117 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 TRGV3P03979 118 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 CT45A6P0DMU7 189 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 CT45A5P0DMU8 189 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 CT45A7P0DMV0 189 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 AREGP15514 252 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 CELP19835 753 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 ZP3P21754 424 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 PSG5Q15238 335 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 AKIRIN2Q53H80 203 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF562Q6V9R5 426 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 MOB1BQ7L9L4 216 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 C6orf201Q7Z4U5 140 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 GRPEL2Q8TAA5 225 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 ABHD14BQ96IU4 210 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 RNF5Q99942 180 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms