RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 CRYGDP07320 174 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 KRT7P08729 469 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 SULT1A3P0DMM9 295 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 SULT1A4P0DMN0 295 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 COX5BP10606 129 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 MYL12AP19105 171 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 S100PP25815 95 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 OR4D2P58180 307 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 SPCS3P61009 180 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 AP1S1P61966 158 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 SNRPD2P62316 118 aaKnown RBP2.42□□□□□ -2.02
CASP4-208ENST00000530309 UBE2IP63279 158 aaKnown RBP2.42□□□□□ -2.02
CASP4-208ENST00000530309 PSPHP78330 225 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 PDGFRLQ15198 375 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 IMPG1Q17R60 797 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 HSD17B12Q53GQ0 312 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 CD200R1LQ6Q8B3 271 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 SDIM1Q6ZPB5 146 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 COMMD7Q86VX2 200 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 DOLPP1Q86YN1 238 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 CLDN22Q8N7P3 220 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 TMEM161BQ8NDZ6 487 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 ATP6V1C2Q8NEY4 427 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 OR1M1Q8NGA1 313 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 OR8D4Q8NGM9 314 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 SFT2D1Q8WV19 159 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 MRPS24Q96EL2 167 aaKnown RBP2.42□□□□□ -2.02
CASP4-208ENST00000530309 TRNT1Q96Q11 434 aaKnown RBP2.42□□□□□ -2.02
CASP4-208ENST00000530309 MRPL57Q9BQC6 102 aaKnown RBP2.42□□□□□ -2.02
CASP4-208ENST00000530309 MED18Q9BUE0 208 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 EMC3Q9P0I2 261 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 TPRKBQ9Y3C4 175 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 FIS1Q9Y3D6 152 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 HSPB11Q9Y547 144 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 ALG5Q9Y673 324 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 DOT1LQ8TEK3 1739 aa2.42□□□□□ -2.02
CASP4-208ENST00000530309 BAZ2BQ9UIF8 2168 aaKnown RBP2.42□□□□□ -2.02
CASP4-208ENST00000530309 CCDC88AQ3V6T2 1871 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 ZNF670-ZNF695F2Z2N8 137 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 NIPSNAP2O75323 286 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 IFNA7P01567 189 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 S100A8P05109 93 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 IL6P05231 212 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 CRHP06850 196 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 PIPP12273 146 aaPredicted RBP2.41□□□□□ -2.02
CASP4-208ENST00000530309 DAPP51397 102 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 HTR4Q13639 388 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 TMEM176BQ3YBM2 270 aaPredicted RBP2.41□□□□□ -2.02
CASP4-208ENST00000530309 TRMT12Q53H54 448 aaKnown RBP2.41□□□□□ -2.02
CASP4-208ENST00000530309 SPANXN3Q5MJ09 141 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 TIMM23BQ5SRD1 257 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 Q6ZRU5 148 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 HAVCR2Q8TDQ0 301 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 TEX37Q96LM6 180 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 PPP3R2Q96LZ3 170 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 PPP1R2P1Q96PQ5 205 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 C2orf88Q9BSF0 95 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 C1orf109Q9NX04 203 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 C3orf18Q9UK00 162 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 NHSQ6T4R5 1651 aa2.41□□□□□ -2.02
CASP4-208ENST00000530309 TAF1LQ8IZX4 1826 aa2.4□□□□□ -2.02
CASP4-208ENST00000530309 A0A096LPI6 279 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 TRGV4A0A0C4DH28 118 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 A8MT66 165 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 HMSDA8MTL9 139 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 MCRIP1C9JLW8 97 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 E5RI56 91 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 G3V2T6 193 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 SMLR1H3BR10 107 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 TOX3O15405 576 aaPredicted RBP2.4□□□□□ -2.03
CASP4-208ENST00000530309 DHFRP00374 187 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 IFI30P13284 250 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 CPMP14384 443 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 UGT2B7P16662 529 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 PVALBP20472 110 aaPredicted RBP2.4□□□□□ -2.03
CASP4-208ENST00000530309 RPS3P23396 243 aaKnown RBP eCLIP2.4□□□□□ -2.03
CASP4-208ENST00000530309 MIPP30301 263 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 EVX1P49640 407 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 PSMB3P49720 205 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 RAB14P61106 215 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.03
CASP4-208ENST00000530309 ANGPTL5Q86XS5 388 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 Q8NDZ9 215 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 OR8J3Q8NGG0 315 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 OR4C16Q8NGL9 310 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 JOSD2Q8TAC2 188 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 C1QTNF6Q9BXI9 259 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 METTL1Q9UBP6 276 aaKnown RBP2.4□□□□□ -2.03
CASP4-208ENST00000530309 LINC00527Q9UJ94 153 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 DNAJC15Q9Y5T4 150 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 RGPD2P0DJD1 1756 aa2.4□□□□□ -2.03
CASP4-208ENST00000530309 SHANK3Q9BYB0 1731 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 INMT-MINDY4F8WBC2 141 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 PDCD5O14737 125 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 TPST1O60507 370 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 SCN2BO60939 215 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 GADD45GO95257 159 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 CRYBA1P05813 215 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 RD3LP0DJH9 198 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms