RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 SRSF8Q9BRL6 282 aaKnown RBP13.21□□□□□ -0.29
PACS1-209ENST00000529757 PRSS46E5RG02 174 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 FBXO24O75426 580 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 VWC2Q2TAL6 325 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 TUSC1Q2TAM9 212 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 FAM74A1Q5RGS3 127 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 ZNF562Q6V9R5 426 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 RBM14Q96PK6 669 aaKnown RBP13.21□□□□□ -0.3
PACS1-209ENST00000529757 SLC25A33Q9BSK2 321 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 GGACTQ9BVM4 153 aa13.21□□□□□ -0.3
PACS1-209ENST00000529757 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.3
PACS1-209ENST00000529757 AKAP9Q99996 3911 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 UBE2L5PA0A1B0GUS4 154 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 H3BUX3 64 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 HLA-DRB1P01911 266 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 ATP6V0CP27449 155 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 CX3CL1P78423 397 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 DLK1P80370 383 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 C9orf139Q6ZV77 190 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 SSMEM1Q8WWF3 244 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 ARPC1AQ92747 370 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 GNPNAT1Q96EK6 184 aaPredicted RBP13.2□□□□□ -0.3
PACS1-209ENST00000529757 P2RX4Q99571 388 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 SLC25A32Q9H2D1 315 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
PACS1-209ENST00000529757 REG1AP05451 166 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 APELAP0DMC3 54 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 SPP1P10451 314 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 AREGP15514 252 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 DEFB112Q30KQ8 113 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 CLLU1Q5K131 121 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 BCL6BQ8N143 479 aaPredicted RBP13.19□□□□□ -0.3
PACS1-209ENST00000529757 TEX29Q8N6K0 151 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 ZNF114Q8NC26 417 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 WDR61Q9GZS3 305 aaKnown RBP13.19□□□□□ -0.3
PACS1-209ENST00000529757 SH3BGRL3Q9H299 93 aa13.19□□□□□ -0.3
PACS1-209ENST00000529757 MDFIC2A0A1B0GVS7 189 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 RPS10-NUDT3A0A1W2PQS6 291 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 RUNX1Q01196 453 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 PITPNC1Q9UKF7 332 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 ABCA1O95477 2261 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 A6NDX4 124 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 FGF16O43320 207 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 C5orf56Q8N8D9 126 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 RNASEH2CQ8TDP1 164 aaKnown RBP13.18□□□□□ -0.3
PACS1-209ENST00000529757 PCNPQ8WW12 178 aaKnown RBP13.18□□□□□ -0.3
PACS1-209ENST00000529757 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
PACS1-209ENST00000529757 TAF15Q92804 592 aaKnown RBP eCLIP13.18□□□□□ -0.3
PACS1-209ENST00000529757 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 SMCO3A2RU48 225 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 CD5LO43866 347 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 NMBP08949 121 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 FGF7P21781 194 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 NDPQ00604 133 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 LY6EQ16553 131 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 LRRC20Q8TCA0 184 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 RNF141Q8WVD5 230 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 FAM103A1Q9BTL3 118 aaKnown RBP13.17□□□□□ -0.3
PACS1-209ENST00000529757 F11RQ9Y624 299 aaKnown RBP13.17□□□□□ -0.3
PACS1-209ENST00000529757 PLXNB1O43157 2135 aa13.17□□□□□ -0.3
PACS1-209ENST00000529757 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 SULT1A2P50226 295 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 KRTAP1-1Q07627 177 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 NDUFA5Q16718 116 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
PACS1-209ENST00000529757 OR2G3Q8NGZ4 309 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 TEX15Q9BXT5 2789 aa13.16□□□□□ -0.3
PACS1-209ENST00000529757 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
PACS1-209ENST00000529757 FAM157CP0CG43 387 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
PACS1-209ENST00000529757 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
PACS1-209ENST00000529757 CD69Q07108 199 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 HSPB9Q9BQS6 159 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
PACS1-209ENST00000529757 RSG1Q9BU20 258 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 NPVFQ9HCQ7 196 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 RFNGQ9Y644 331 aa13.15□□□□□ -0.3
PACS1-209ENST00000529757 M0QZK8 103 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 CTRB1P17538 263 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 BTNL8Q6UX41 500 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 TREML4Q6UXN2 200 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.31
PACS1-209ENST00000529757 C16orf82Q7Z2V1 217 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 CACNG8Q8WXS5 425 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.31
PACS1-209ENST00000529757 ZNF469Q96JG9 3925 aaPredicted RBP13.14□□□□□ -0.31
PACS1-209ENST00000529757 CORTO00230 105 aa13.14□□□□□ -0.31
PACS1-209ENST00000529757 MPDU1O75352 247 aa13.14□□□□□ -0.31
PACS1-209ENST00000529757 IGHV4-59P01825 116 aa13.14□□□□□ -0.31
PACS1-209ENST00000529757 OPRK1P41145 380 aa13.14□□□□□ -0.31
PACS1-209ENST00000529757 RAB5CP51148 216 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms