RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 OR13C4Q8NGS5 318 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 GRPEL2Q8TAA5 225 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 SLC25A40Q8TBP6 338 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 ACOT12Q8WYK0 555 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 EFCAB1Q9HAE3 211 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 XAGE1AQ9HD64 81 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 OR5V1Q9UGF6 321 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 SNX12Q9UMY4 172 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 CYSLTR1Q9Y271 337 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 R4GN34 69 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 ARHGEF10O15013 1369 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 FMN1Q68DA7 1419 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 NCOA3Q9Y6Q9 1424 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 REREQ9P2R6 1566 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 DOCK4Q8N1I0 1966 aa2.3□□□□□ -2.04
C11orf88-204ENST00000529661 EML6Q6ZMW3 1958 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 NUP210Q8TEM1 1887 aaPredicted RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 J3QRK9 145 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 M0QZK8 103 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 ARPC5O15511 151 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 IFNA10P01566 189 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 IGHV3-53P01767 116 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 OR10J4P0C629 311 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 CCL3P10147 92 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 HRES1P13985 223 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 BLVRBP30043 206 aaPredicted RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 RPL27AP46776 148 aaKnown RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 SERPINB10P48595 397 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 RAB13P51153 203 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 FOXA1P55317 472 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 RWDD2BP57060 319 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 DHRS2Q13268 280 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 ZNF660Q6AZW8 331 aaPredicted RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 SSX8Q7RTT4 187 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 DHFR2Q86XF0 187 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 NUP35Q8NFH5 326 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 ZNF675Q8TD23 568 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 TVP23CQ96ET8 276 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 RMND5BQ96G75 393 aaPredicted RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 EFCAB11Q9BUY7 163 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 MND1Q9BWT6 205 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 IMUPQ9GZP8 106 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 ZNF443Q9Y2A4 671 aaPredicted RBP2.29□□□□□ -2.04
C11orf88-204ENST00000529661 U3KQK5 164 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 SHANK1Q9Y566 2161 aa2.29□□□□□ -2.04
C11orf88-204ENST00000529661 UHRF1BP1Q6BDS2 1440 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 PTPRJQ12913 1337 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 PRR14LQ5THK1 2151 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 TRAV38-1A0A0B4J264 116 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 IGKV2-24A0A0C4DH68 120 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 A0A1W2PNN7 141 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 GRIFINA4D1Z8 144 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 A8MWP6 167 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 UBE2L6O14933 153 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 OR2J2O76002 312 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 APOA2P02652 100 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 CSN2P05814 226 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 COL8A2P25067 703 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 CRABP2P29373 138 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 GABRA2P47869 451 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 RBM11P57052 281 aaKnown RBP2.28□□□□□ -2.04
C11orf88-204ENST00000529661 PIGPP57054 158 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 TAS2R20P59543 309 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 CDC42P60953 191 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 RPL30P62888 115 aaKnown RBP2.28□□□□□ -2.04
C11orf88-204ENST00000529661 RHEBQ15382 184 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 AMMECR1LQ6DCA0 310 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 RASL11AQ6T310 242 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 SDIM1Q6ZPB5 146 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 CLVS1Q8IUQ0 354 aaPredicted RBP2.28□□□□□ -2.04
C11orf88-204ENST00000529661 OR10D4PQ8NGN7 298 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 HSPB9Q9BQS6 159 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 SPANXCQ9NY87 97 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 HEATR5AQ86XA9 2040 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 OBSL1O75147 1896 aa2.28□□□□□ -2.04
C11orf88-204ENST00000529661 TRPM3Q9HCF6 1732 aaPredicted RBP2.28□□□□□ -2.05
C11orf88-204ENST00000529661 LTBP4Q8N2S1 1624 aa2.28□□□□□ -2.05
C11orf88-204ENST00000529661 TRPM6Q9BX84 2022 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 CRB1P82279 1406 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 IGKV1D-37A0A075B6S9 117 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 A0A0B4J2C4 111 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 RIIAD1A6NNX1 92 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 C17orf51A8MQB3 221 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 I3L521 148 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 GADD45GO95257 159 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 CPSF4O95639 269 aaKnown RBP2.27□□□□□ -2.05
C11orf88-204ENST00000529661 IGKV1-5P01602 117 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 C1QAP02745 245 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 PRM2P04554 102 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 SMIM17P0DL12 118 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 SLC25A16P16260 332 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 GZMHP20718 246 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BOP23527 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 CRHBPP24387 322 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BBP33778 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 SRP9P49458 86 aaKnown RBP2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BDP58876 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 TPI1P60174 286 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BCP62807 126 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms