RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 OR5B3Q8NH48 314 aa19.19■□□□□ 0.66
TRIM3-206ENST00000528227 YIPF6Q96EC8 236 aa19.19■□□□□ 0.66
TRIM3-206ENST00000528227 TMEM56Q96MV1 263 aa19.19■□□□□ 0.66
TRIM3-206ENST00000528227 FKBP11Q9NYL4 201 aa19.19■□□□□ 0.66
TRIM3-206ENST00000528227 IGHV3OR16-8A0A075B7F1 116 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 A0A0J9YWU9 116 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 DBX1A6NMT0 343 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 SPRY2O43597 315 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 HRH1P35367 487 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 LSM3P62310 102 aaKnown RBP19.18■□□□□ 0.66
TRIM3-206ENST00000528227 Q56UQ5 140 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 TMEM14BQ9NUH8 114 aa19.18■□□□□ 0.66
TRIM3-206ENST00000528227 C15orf61A6NNL5 157 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 ZNF207O43670 478 aaKnown RBP19.17■□□□□ 0.66
TRIM3-206ENST00000528227 HLA-DMAP28067 261 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 BMI1P35226 326 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 TNFRSF9Q07011 255 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 DEFB135Q30KP9 77 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 PHLDA2Q53GA4 152 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 ZNF414Q96IQ9 312 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 TSC22D3Q99576 134 aa19.17■□□□□ 0.66
TRIM3-206ENST00000528227 C15orf62A8K5M9 175 aa19.16■□□□□ 0.66
TRIM3-206ENST00000528227 UBE2CO00762 179 aa19.16■□□□□ 0.66
TRIM3-206ENST00000528227 CTSGP08311 255 aa19.16■□□□□ 0.66
TRIM3-206ENST00000528227 EWSR1Q01844 656 aaKnown RBP eCLIP19.16■□□□□ 0.66
TRIM3-206ENST00000528227 LYG2Q86SG7 212 aa19.16■□□□□ 0.66
TRIM3-206ENST00000528227 OR1P1Q8NH06 330 aa19.16■□□□□ 0.66
TRIM3-206ENST00000528227 LINC00476Q8WZB0 136 aa19.16■□□□□ 0.66
TRIM3-206ENST00000528227 FAM212BQ9NTI7 297 aaPredicted RBP19.16■□□□□ 0.66
TRIM3-206ENST00000528227 KIR2DL5BA0A0G2JN68 375 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 KIR2DL5BA0A0G2JPC4 375 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 CXorf65A6NEN9 183 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 OR4C46A6NHA9 309 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 EIF4EP06730 217 aaKnown RBP19.15■□□□□ 0.66
TRIM3-206ENST00000528227 CTSDP07339 412 aaPredicted RBP19.15■□□□□ 0.66
TRIM3-206ENST00000528227 PMS2P11Q13670 270 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 KIR2DL5AQ8N109 375 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 KIR2DL5BQ8NHK3 375 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 GPX8Q8TED1 209 aa19.15■□□□□ 0.66
TRIM3-206ENST00000528227 LPCAT3Q6P1A2 487 aa19.14■□□□□ 0.65
TRIM3-206ENST00000528227 STPG3Q8N7X2 389 aa19.14■□□□□ 0.65
TRIM3-206ENST00000528227 SLC25A46Q96AG3 418 aa19.14■□□□□ 0.65
TRIM3-206ENST00000528227 SMPXQ9UHP9 88 aa19.14■□□□□ 0.65
TRIM3-206ENST00000528227 TSPAN5P62079 268 aa19.13■□□□□ 0.65
TRIM3-206ENST00000528227 TBC1D26Q86UD7 250 aa19.13■□□□□ 0.65
TRIM3-206ENST00000528227 RNF183Q96D59 192 aa19.13■□□□□ 0.65
TRIM3-206ENST00000528227 SEC22AQ96IW7 307 aa19.13■□□□□ 0.65
TRIM3-206ENST00000528227 NUPR2A6NF83 97 aa19.12■□□□□ 0.65
TRIM3-206ENST00000528227 I3L2K1 104 aa19.12■□□□□ 0.65
TRIM3-206ENST00000528227 S100GP29377 79 aa19.12■□□□□ 0.65
TRIM3-206ENST00000528227 FCGR2BP31994 310 aaPredicted RBP19.12■□□□□ 0.65
TRIM3-206ENST00000528227 RELQ04864 619 aaPredicted RBP19.12■□□□□ 0.65
TRIM3-206ENST00000528227 RNF2Q99496 336 aa19.12■□□□□ 0.65
TRIM3-206ENST00000528227 IGHV7-4-1A0A0J9YVY3 117 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 NUPL2O15504 423 aaKnown RBP19.11■□□□□ 0.65
TRIM3-206ENST00000528227 IGKV1-39P01597 117 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 IGKV1D-39P04432 117 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 RPL35AP18077 110 aaKnown RBP19.11■□□□□ 0.65
TRIM3-206ENST00000528227 ZNF114Q8NC26 417 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 OR4A16Q8NH70 328 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 MISP3Q96FF7 219 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 GALNT14Q96FL9 552 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 OR10C1Q96KK4 312 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 MAP6D1Q9H9H5 199 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 SCPEP1Q9HB40 452 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 VCX3AQ9NNX9 186 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 COMMD3Q9UBI1 195 aa19.11■□□□□ 0.65
TRIM3-206ENST00000528227 A0A087WXM4 84 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 CHEK1O14757 476 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 ATF4P18848 351 aaPredicted RBP19.1■□□□□ 0.65
TRIM3-206ENST00000528227 MFAP4P55083 255 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 H2BFWTQ7Z2G1 175 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 TMEM116Q8NCL8 245 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 CMTM3Q96MX0 182 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 TXN2Q99757 166 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 RHPN1-AS1Q9BWJ2 59 aa19.1■□□□□ 0.65
TRIM3-206ENST00000528227 SMIM31A0A1B0GVY4 71 aa19.09■□□□□ 0.65
TRIM3-206ENST00000528227 APOA1P02647 267 aa19.09■□□□□ 0.65
TRIM3-206ENST00000528227 UCP3P55916 312 aa19.09■□□□□ 0.65
TRIM3-206ENST00000528227 PRCDQ00LT1 54 aa19.09■□□□□ 0.65
TRIM3-206ENST00000528227 CEMP1Q6PRD7 247 aaPredicted RBP19.09■□□□□ 0.65
TRIM3-206ENST00000528227 APRG1Q8IVJ8 170 aa19.09■□□□□ 0.65
TRIM3-206ENST00000528227 MRGPRFQ96AM1 343 aa19.09■□□□□ 0.65
TRIM3-206ENST00000528227 NXF2Q9GZY0 626 aaKnown RBP19.09■□□□□ 0.65
TRIM3-206ENST00000528227 YIF1AO95070 293 aa19.08■□□□□ 0.64
TRIM3-206ENST00000528227 LY6G6CO95867 125 aa19.08■□□□□ 0.64
TRIM3-206ENST00000528227 MT-CO2P00403 227 aa19.08■□□□□ 0.64
TRIM3-206ENST00000528227 RCVRNP35243 200 aa19.08■□□□□ 0.64
TRIM3-206ENST00000528227 SNX29P2Q8IUI4 249 aa19.08■□□□□ 0.64
TRIM3-206ENST00000528227 IGHV3-49A0A0A0MS15 119 aa19.07■□□□□ 0.64
TRIM3-206ENST00000528227 HSPE1P61604 102 aaKnown RBP19.07■□□□□ 0.64
TRIM3-206ENST00000528227 NCS1P62166 190 aa19.07■□□□□ 0.64
TRIM3-206ENST00000528227 IGHV3-48P01763 117 aa19.06■□□□□ 0.64
TRIM3-206ENST00000528227 ZNF124Q15973 351 aa19.06■□□□□ 0.64
TRIM3-206ENST00000528227 C6orf62Q9GZU0 229 aaPredicted RBP19.06■□□□□ 0.64
TRIM3-206ENST00000528227 TRAV14DV4A0A0A6YYC5 116 aa19.05■□□□□ 0.64
TRIM3-206ENST00000528227 TNFAIP8O95379 198 aa19.05■□□□□ 0.64
TRIM3-206ENST00000528227 ELK1P19419 428 aa19.05■□□□□ 0.64
TRIM3-206ENST00000528227 TFPI2P48307 235 aa19.05■□□□□ 0.64
TRIM3-206ENST00000528227 CMC4P56277 68 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms