RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 P2RX4Q99571 388 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 PHB2Q99623 299 aa8.34□□□□□ -1.07
NEDD8-205ENST00000527046 TMEM50AO95807 157 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 RNASE2P10153 161 aaKnown RBP8.33□□□□□ -1.08
NEDD8-205ENST00000527046 PAX9P55771 341 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 THOC7Q6I9Y2 204 aaKnown RBP8.33□□□□□ -1.08
NEDD8-205ENST00000527046 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 OR4X2Q8NGF9 303 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 HINT2Q9BX68 163 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 RBKSQ9H477 322 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 ZFP57Q9NU63 452 aa8.33□□□□□ -1.08
NEDD8-205ENST00000527046 TSSC4Q9Y5U2 329 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-205ENST00000527046 F8W735 103 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-205ENST00000527046 PRAF2O60831 178 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 OR2J3O76001 311 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 SIX6O95475 246 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 TRGV3P03979 118 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 RUNX1Q01196 453 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 TNFRSF9Q07011 255 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 MLANAQ16655 118 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 TATDN3Q17R31 274 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-205ENST00000527046 ZBTB8BQ8NAP8 495 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-205ENST00000527046 SLA2Q9H6Q3 261 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 F11RQ9Y624 299 aaKnown RBP8.32□□□□□ -1.08
NEDD8-205ENST00000527046 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
NEDD8-205ENST00000527046 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 A0A1W2PRX2 142 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 I3L2K1 104 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 K7EIM0 57 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 TSPAN15O95858 294 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 DHFRP00374 187 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 IFNA17P01571 189 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 TRBV12-3P01733 135 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 IGHV3-11P01762 117 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 TPPP2P59282 170 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 RHOGP84095 191 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 RGS21Q2M5E4 152 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 IAH1Q2TAA2 248 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-205ENST00000527046 NSUN5P1Q3KNT7 163 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 C8orf86Q6ZUL3 223 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 OR1P1Q8NH06 330 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 RNASE11Q8TAA1 199 aaKnown RBP8.31□□□□□ -1.08
NEDD8-205ENST00000527046 RAX2Q96IS3 184 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 OR5B12Q96R08 314 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 MRPL36Q9P0J6 103 aaKnown RBP8.31□□□□□ -1.08
NEDD8-205ENST00000527046 FBXL7Q9UJT9 491 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 S4R3C0 116 aa8.31□□□□□ -1.08
NEDD8-205ENST00000527046 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 MBPP02686 304 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-205ENST00000527046 H2BFSP57053 126 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEDD8-205ENST00000527046 FHL3Q13643 280 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 DEFB136Q30KP8 78 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 TMEM65Q6PI78 240 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 UXS1Q8NBZ7 420 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 NECAP1Q8NC96 275 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 C2orf50Q96LR7 162 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 DUX3Q96PT4 197 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 FNDC4Q9H6D8 234 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-205ENST00000527046 PLEKHA3Q9HB20 300 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 GPN1Q9HCN4 374 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-205ENST00000527046 ZNF355PQ9NSJ1 428 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 WNK1Q9H4A3 2382 aa8.3□□□□□ -1.08
NEDD8-205ENST00000527046 PIGBOS1A0A0B4J2F0 54 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 C13orf42A0A1B0GVH6 325 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 FAM223BA6NKX1 122 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 C15orf62A8K5M9 175 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 SYNGR2O43760 224 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 IFNA21P01568 189 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 CXCL3P19876 107 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
NEDD8-205ENST00000527046 C15orf32Q32M92 178 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 C2orf83Q53S99 150 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 SLC25A24Q6NUK1 477 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 FAM223AQ8IWN6 122 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 OR11H7Q8NGC8 314 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 ZNF502Q8TBZ5 544 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 DTD1Q8TEA8 209 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 SCARB1Q8WTV0 552 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 USMG5Q96IX5 58 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 RCL1Q9Y2P8 373 aaKnown RBP8.29□□□□□ -1.08
NEDD8-205ENST00000527046 FBN3Q75N90 2809 aa8.29□□□□□ -1.08
NEDD8-205ENST00000527046 IGHV4OR15-8A0A075B7B6 117 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 A0A087WW49 117 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.28□□□□□ -1.08
NEDD8-205ENST00000527046 IGHV3-21A0A0B4J1V1 117 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms