RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 OR2C1O95371 312 aa12.84□□□□□ -0.35
USH1C-204ENST00000526313 GPX4P36969 197 aaPredicted RBP12.84□□□□□ -0.35
USH1C-204ENST00000526313 B2MP61769 119 aa12.84□□□□□ -0.35
USH1C-204ENST00000526313 CD69Q07108 199 aa12.84□□□□□ -0.35
USH1C-204ENST00000526313 STPG3Q8N7X2 389 aa12.84□□□□□ -0.35
USH1C-204ENST00000526313 OR4P4Q8NGL7 312 aa12.84□□□□□ -0.35
USH1C-204ENST00000526313 CHODLQ9H9P2 273 aa12.84□□□□□ -0.35
USH1C-204ENST00000526313 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 hCG_1809904A0A1W2PP81 198 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 A0A1W2PR64 198 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 A0A1W2PRV1 198 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 IGFBP2P18065 325 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 DLX1P56177 255 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 WT1-ASQ06250 92 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 GAMTQ14353 236 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 MALSU1Q96EH3 234 aa12.83□□□□□ -0.35
USH1C-204ENST00000526313 DCHS2Q6V1P9 2916 aa12.83□□□□□ -0.36
USH1C-204ENST00000526313 IGKV1OR2-108A0A075B7D4 117 aa12.83□□□□□ -0.36
USH1C-204ENST00000526313 PAGE4O60829 102 aa12.83□□□□□ -0.36
USH1C-204ENST00000526313 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
USH1C-204ENST00000526313 TMEM242Q9NWH2 141 aa12.83□□□□□ -0.36
USH1C-204ENST00000526313 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 SLC25A17O43808 307 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 CYP2G1PQ6ZSU1 146 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 MOB3BQ86TA1 216 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 ABHD5Q8WTS1 349 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 AMMECR1Q9Y4X0 333 aaPredicted RBP12.82□□□□□ -0.36
USH1C-204ENST00000526313 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 RAB5AP20339 215 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 OR11H6Q8NGC7 330 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
USH1C-204ENST00000526313 TPSG1Q9NRR2 321 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 NAT8Q9UHE5 227 aa12.82□□□□□ -0.36
USH1C-204ENST00000526313 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 M0R1W7 72 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 CXorf1O96002 111 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 GNLYP22749 145 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 UQCRFS1P47985 274 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 HABP2Q14520 560 aaPredicted RBP12.81□□□□□ -0.36
USH1C-204ENST00000526313 PRSS8Q16651 343 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 MLANAQ16655 118 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 C10orf55Q5SWW7 151 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 SPNS3Q6ZMD2 512 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 PNKDQ8N490 385 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 OR4F5Q8NH21 305 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 OR4F4Q96R69 305 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 RNF5Q99942 180 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 TXNDC17Q9BRA2 123 aa12.81□□□□□ -0.36
USH1C-204ENST00000526313 A6NNC1 897 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 ENSAO43768 121 aaKnown RBP12.8□□□□□ -0.36
USH1C-204ENST00000526313 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 RHOBP62745 196 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 PSG5Q15238 335 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 IQCF2Q8IXL9 164 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 MMD2Q8IY49 270 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 SLC35E1Q96K37 410 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 SEPSECSQ9HD40 501 aaKnown RBP12.8□□□□□ -0.36
USH1C-204ENST00000526313 A0A1W2PPI3 338 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 C11orf94C9JXX5 98 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 NPPCP23582 126 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 COX7A1P24310 79 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 PRB3Q04118 309 aaPredicted RBP12.8□□□□□ -0.36
USH1C-204ENST00000526313 TMEM241Q24JQ0 296 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 LDLRAD2Q5SZI1 272 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 FAM122AQ96E09 287 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 SSBP3Q9BWW4 388 aaPredicted RBP12.8□□□□□ -0.36
USH1C-204ENST00000526313 PARLQ9H300 379 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 SIGLEC9Q9Y336 463 aa12.8□□□□□ -0.36
USH1C-204ENST00000526313 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
USH1C-204ENST00000526313 RND2P52198 227 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 SUB1P53999 127 aaKnown RBP eCLIP12.79□□□□□ -0.36
USH1C-204ENST00000526313 ELOBQ15370 118 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 C1orf122Q6ZSJ8 110 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 SLC16A13Q7RTY0 426 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 SAV1Q9H4B6 383 aaPredicted RBP12.79□□□□□ -0.36
USH1C-204ENST00000526313 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 LOC105371242A0A075B767 164 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 IGLC7A0M8Q6 106 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 PDE6DO43924 150 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 C1QL4Q86Z23 238 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 NANPQ8TBE9 248 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 RPEQ96AT9 228 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 C19orf24Q9BVV8 132 aa12.79□□□□□ -0.36
USH1C-204ENST00000526313 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 C1orf196B1AJZ1 125 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 PRTN3P24158 256 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 CNTFRP26992 372 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 OR10J1P30954 320 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 RAB5BP61020 215 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 HCP5Q6MZN7 132 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 CTDSP1Q9GZU7 261 aa12.78□□□□□ -0.36
USH1C-204ENST00000526313 FNDC4Q9H6D8 234 aaPredicted RBP12.78□□□□□ -0.36
USH1C-204ENST00000526313 C19orf84I3L1E1 186 aa12.77□□□□□ -0.36
USH1C-204ENST00000526313 GCHFRP30047 84 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms