RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 HINT2Q9BX68 163 aa16.13■□□□□ 0.17
CD44-222ENST00000526025 INMT-MINDY4F8WBC2 141 aa16.12■□□□□ 0.17
CD44-222ENST00000526025 PRR31Q5SQ13 230 aa16.12■□□□□ 0.17
CD44-222ENST00000526025 KLHL30-AS1Q8NEE0 82 aa16.12■□□□□ 0.17
CD44-222ENST00000526025 MS4A10Q96PG2 267 aa16.12■□□□□ 0.17
CD44-222ENST00000526025 FANCD2OSQ96PS1 177 aa16.12■□□□□ 0.17
CD44-222ENST00000526025 GPN1Q9HCN4 374 aaPredicted RBP16.12■□□□□ 0.17
CD44-222ENST00000526025 HSPB7Q9UBY9 170 aa16.12■□□□□ 0.17
CD44-222ENST00000526025 IGLV11-55A0A075B6I3 123 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 SNRPGP15A8MWD9 76 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 NUDT19A8MXV4 375 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 FAM90A26D6RGX4 464 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 IFNA21P01568 189 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 HOXB5P09067 269 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 ERHP84090 104 aaKnown RBP16.11■□□□□ 0.17
CD44-222ENST00000526025 GGNBP1Q5YKI7 109 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 HIST2H2BDQ6DRA6 164 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 SEC22CQ9BRL7 303 aa16.11■□□□□ 0.17
CD44-222ENST00000526025 F11RQ9Y624 299 aaKnown RBP16.11■□□□□ 0.17
CD44-222ENST00000526025 A0A1W2PRX2 142 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 I3L521 148 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 REG1AP05451 166 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 LGALS1P09382 135 aaKnown RBP16.1■□□□□ 0.17
CD44-222ENST00000526025 DEFA4P12838 97 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 RHOGP84095 191 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 FAM209BQ5JX69 171 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 C12orf45Q8N5I9 185 aaPredicted RBP16.1■□□□□ 0.17
CD44-222ENST00000526025 OR1P1Q8NH06 330 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 GNB4Q9HAV0 340 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 ENY2Q9NPA8 101 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 THYN1Q9P016 225 aa16.1■□□□□ 0.17
CD44-222ENST00000526025 VWFP04275 2813 aa16.09■□□□□ 0.17
CD44-222ENST00000526025 C13orf42A0A1B0GVH6 325 aa16.09■□□□□ 0.17
CD44-222ENST00000526025 TNFRSF9Q07011 255 aa16.09■□□□□ 0.17
CD44-222ENST00000526025 OR1S1Q8NH92 325 aa16.09■□□□□ 0.17
CD44-222ENST00000526025 ADAP1O75689 374 aa16.08■□□□□ 0.16
CD44-222ENST00000526025 TSPAN15O95858 294 aa16.08■□□□□ 0.16
CD44-222ENST00000526025 PRH1P02810 166 aa16.08■□□□□ 0.16
CD44-222ENST00000526025 HOXA1P49639 335 aaPredicted RBP16.08■□□□□ 0.16
CD44-222ENST00000526025 C18orf65Q6ZTR6 163 aa16.08■□□□□ 0.16
CD44-222ENST00000526025 C8orf86Q6ZUL3 223 aa16.08■□□□□ 0.16
CD44-222ENST00000526025 MYCNOSP40205 109 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 ATP5G2Q06055 141 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 FHL3Q13643 280 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 BSXQ3C1V8 233 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 PVRIGQ6DKI7 326 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 ZNF343Q6P1L6 599 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 C19orf35Q6ZS72 473 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 P2RX4Q99571 388 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 FBXL7Q9UJT9 491 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 DMRT1Q9Y5R6 373 aa16.07■□□□□ 0.16
CD44-222ENST00000526025 MED6O75586 246 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 OR2J3O76001 311 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 LY86O95711 162 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 SPNP16150 400 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 SNCAP37840 140 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 SUB1P53999 127 aaKnown RBP eCLIP16.06■□□□□ 0.16
CD44-222ENST00000526025 RGS21Q2M5E4 152 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 C15orf32Q32M92 178 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 SPINK9Q5DT21 86 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 ETV3LQ6ZN32 361 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 CXorf58Q96LI9 332 aa16.06■□□□□ 0.16
CD44-222ENST00000526025 CEBPZOSA8MTT3 80 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 CCL24O00175 119 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 CORTO00230 105 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 HTR2BP41595 481 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 MFAP2P55001 183 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 ATP5IP56385 69 aaPredicted RBP16.05■□□□□ 0.16
CD44-222ENST00000526025 VN1R17PQ8TDU5 208 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 RAX2Q96IS3 184 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 ATP6V0BQ99437 205 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
CD44-222ENST00000526025 C7orf66A4D0T2 115 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 NDUFB8O95169 186 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 IGHV3-11P01762 117 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 PF4P02776 101 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 HSPB1P04792 205 aaKnown RBP16.04■□□□□ 0.16
CD44-222ENST00000526025 RNASE2P10153 161 aaKnown RBP16.04■□□□□ 0.16
CD44-222ENST00000526025 ID3Q02535 119 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 EXOSC2Q13868 293 aaKnown RBP16.04■□□□□ 0.16
CD44-222ENST00000526025 SLC25A24Q6NUK1 477 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 OR4D5Q8NGN0 318 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 DTD1Q8TEA8 209 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 RBKSQ9H477 322 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 HEYLQ9NQ87 328 aaPredicted RBP16.04■□□□□ 0.16
CD44-222ENST00000526025 PKD1L1Q8TDX9 2849 aa16.04■□□□□ 0.16
CD44-222ENST00000526025 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.03■□□□□ 0.16
CD44-222ENST00000526025 TRBV7-1A0A0A6YYK4 115 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 MPTX1A8MV57 137 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 ZNF616Q08AN1 781 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 IAH1Q2TAA2 248 aaPredicted RBP16.03■□□□□ 0.16
CD44-222ENST00000526025 C2orf83Q53S99 150 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 NOXA1Q86UR1 476 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 OR11H1Q8NG94 326 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 EEF1AKMT3Q96AZ1 226 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 OR10C1Q96KK4 312 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 CIB3Q96Q77 187 aaPredicted RBP16.03■□□□□ 0.16
CD44-222ENST00000526025 U3KQ87 197 aa16.03■□□□□ 0.16
CD44-222ENST00000526025 CMYA5Q8N3K9 4069 aa16.02■□□□□ 0.16
CD44-222ENST00000526025 OR8U8P0C7N1 319 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms