RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GNB4Q9HAV0 340 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 RAB18Q9NP72 206 aa5.04□□□□□ -1.6
CD44-214ENST00000525211 MRPL36Q9P0J6 103 aaKnown RBP5.04□□□□□ -1.6
CD44-214ENST00000525211 TRRAPQ9Y4A5 3859 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 C13orf42A0A1B0GVH6 325 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 PSMB11A5LHX3 300 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 H0YIZ8 118 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 AP4M1O00189 453 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 GOSR2O14653 212 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 KCNAB3O43448 404 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 B3GALNT1O75752 331 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 SNAPC5O75971 98 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 NDUFB8O95169 186 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 IGHV3-48P01763 117 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 IGHV3-23P01764 117 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 IGHG4P01861 327 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 TRAPPC2P0DI81 140 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 TRAPPC2BP0DI82 140 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 OR13C7P0DN81 318 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 RNASE2P10153 161 aaKnown RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 IAPPP10997 89 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 VDAC1P21796 283 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 PSMB8P28062 276 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 PSMB6P28072 239 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 HSPE1P61604 102 aaKnown RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 POLR2GP62487 172 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD44-214ENST00000525211 PRCDQ00LT1 54 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 CD83Q01151 205 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 SMCO1Q147U7 214 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 Q6ZNX1 250 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 CENPVQ7Z7K6 275 aaPredicted RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 TTC9CQ8N5M4 171 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 OR1L8Q8NGR8 309 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 OR4A16Q8NH70 328 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 RNASE11Q8TAA1 199 aaKnown RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 VSTM2AQ8TAG5 236 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 MYOZ3Q8TDC0 251 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 TMEM158Q8WZ71 300 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 RRNAD1Q96FB5 475 aaKnown RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 BSCL2Q96G97 398 aaPredicted RBP5.03□□□□□ -1.6
CD44-214ENST00000525211 OR5B12Q96R08 314 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 CITED1Q99966 193 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 HSPB7Q9UBY9 170 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 FBXL7Q9UJT9 491 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 PRNDQ9UKY0 176 aa5.03□□□□□ -1.6
CD44-214ENST00000525211 TRAV14DV4A0A0A6YYC5 116 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 A0A1B0GU03 582 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 MFSD2BA6NFX1 497 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 C15orf62A8K5M9 175 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 SNRPGP15A8MWD9 76 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 FAM25EA8MYX2 175 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 G3V3Q6 166 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 OR2J3O76001 311 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 IFNA17P01571 189 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 IGHV3-11P01762 117 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 CRYGCP07315 174 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 SULT1A3P0DMM9 295 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 SULT1A4P0DMN0 295 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 PF4V1P10720 104 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 ANXA3P12429 323 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 MAS1LP35410 378 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 TNFRSF9Q07011 255 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 FOXL1Q12952 345 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 IAH1Q2TAA2 248 aaPredicted RBP5.02□□□□□ -1.61
CD44-214ENST00000525211 DEFB136Q30KP8 78 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 PDLIM3Q53GG5 364 aaPredicted RBP5.02□□□□□ -1.61
CD44-214ENST00000525211 AKIRIN2Q53H80 203 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 ETV3LQ6ZN32 361 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 HAPLN4Q86UW8 402 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 ZNF429Q86V71 674 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 OR2C3Q8N628 320 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 ZNF491Q8N8L2 437 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 RNF152Q8N8N0 203 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 OR1S1Q8NH92 325 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 COQ8AQ8NI60 647 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 OR4C12Q96R67 309 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 PHB2Q99623 299 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 RNF126Q9BV68 326 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 COMMD5Q9GZQ3 224 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 FNDC4Q9H6D8 234 aaPredicted RBP5.02□□□□□ -1.61
CD44-214ENST00000525211 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.02□□□□□ -1.61
CD44-214ENST00000525211 GSKIPQ9P0R6 139 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 MGAT4CQ9UBM8 478 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 ZNF580Q9UK33 172 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 RCL1Q9Y2P8 373 aaKnown RBP5.02□□□□□ -1.61
CD44-214ENST00000525211 TMED3Q9Y3Q3 217 aa5.02□□□□□ -1.61
CD44-214ENST00000525211 IGLV11-55A0A075B6I3 123 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 TRBV9A0A0B4J1U6 114 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 DUXBA0A1W2PPF3 345 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 C5orf51A6NDU8 294 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 NPIPB5A8MRT5 1133 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 H3BP45 60 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 SMLR1H3BR10 107 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 K7EIM0 57 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 K7EPK0 472 aa5.01□□□□□ -1.61
CD44-214ENST00000525211 WRBO00258 174 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms