RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 BPIFB3P59826 476 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 SELENOTP62341 195 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 EBI3Q14213 229 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 TREML4Q6UXN2 200 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 SLC16A13Q7RTY0 426 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 LHFPL4Q7Z7J7 247 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 LINC01356Q8N9X3 169 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 OR1P1Q8NH06 330 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 RASL11BQ9BPW5 248 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 SEC11CQ9BY50 192 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 FAM96BQ9Y3D0 163 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 PXMP4Q9Y6I8 212 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
VPS13B-212ENST00000524330 SPENQ96T58 3664 aaKnown RBP8.01□□□□□ -1.13
VPS13B-212ENST00000524330 IGHV4-30-2A0A087WSY4 118 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 IGHV1-69DA0A0B4J2H0 117 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 NCBP2LA6PVI3 153 aaKnown RBP8□□□□□ -1.13
VPS13B-212ENST00000524330 PRSS46E5RG02 174 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 NDUFS6O75380 124 aaKnown RBP8□□□□□ -1.13
VPS13B-212ENST00000524330 SNAPINO95295 136 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 IGHV1-69P01742 117 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 APOC3P02656 99 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 DEFA4P12838 97 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 DLX1P56177 255 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 B2MP61769 119 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 RHOBP62745 196 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 DEFA5Q01523 94 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 SRSF1Q07955 248 aaKnown RBP eCLIP8□□□□□ -1.13
VPS13B-212ENST00000524330 PMS2P11Q13670 270 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 C5orf64Q2M2E5 130 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 KHDC3LQ587J8 217 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 FAM122CQ6P4D5 195 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 S100A7AQ86SG5 101 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 TEX29Q8N6K0 151 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 SRSF12Q8WXF0 261 aaKnown RBP8□□□□□ -1.13
VPS13B-212ENST00000524330 LINC00052Q96N35 136 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 P2RX4Q99571 388 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 MANBALQ9NQG1 85 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 THYN1Q9P016 225 aa8□□□□□ -1.13
VPS13B-212ENST00000524330 HSPB1P04792 205 aaKnown RBP7.99□□□□□ -1.13
VPS13B-212ENST00000524330 CD5P06127 495 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 PLA2G2AP14555 144 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 MYOD1P15172 320 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 SAA4P35542 130 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 PSMB3P49720 205 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 FHITP49789 147 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 TAS2R45P59539 299 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 PRB3Q04118 309 aaPredicted RBP7.99□□□□□ -1.13
VPS13B-212ENST00000524330 FXYD3Q14802 87 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 DEFB113Q30KQ7 82 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 ZNF506Q5JVG8 444 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 DOPEY1Q5JWR5 2465 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 LCN15Q6UWW0 184 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 PRSS57Q6UWY2 283 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 ZNF562Q6V9R5 426 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 OR10W1Q8NGF6 305 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 OR1L4Q8NGR5 311 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 SUN5Q8TC36 379 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 MISP3Q96FF7 219 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 C1orf159Q96HA4 380 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 RCC1LQ96I51 464 aaKnown RBP7.99□□□□□ -1.13
VPS13B-212ENST00000524330 TMEM68Q96MH6 324 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 PFDN5Q99471 154 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 TXNDC17Q9BRA2 123 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 GGTLC1Q9BX51 225 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 SLC35B3Q9H1N7 401 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 C7orf69Q9H7B7 122 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 USP24Q9UPU5 2620 aa7.99□□□□□ -1.13
VPS13B-212ENST00000524330 CARHSP1Q9Y2V2 147 aaKnown RBP7.99□□□□□ -1.13
VPS13B-212ENST00000524330 LSM4Q9Y4Z0 139 aaKnown RBP7.99□□□□□ -1.13
VPS13B-212ENST00000524330 F11RQ9Y624 299 aaKnown RBP7.99□□□□□ -1.13
VPS13B-212ENST00000524330 CENPVL3A0A0U1RRI6 287 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 A0A1B0GV50 99 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 IGLC7A0M8Q6 106 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 SEC14L6B5MCN3 397 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 CXorf1O96002 111 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 SFTA3P0C7M3 94 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 HIST1H1BP16401 226 aaKnown RBP7.98□□□□□ -1.13
VPS13B-212ENST00000524330 CNTFRP26992 372 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 S100A7P31151 101 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 WT1-ASQ06250 92 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 LOXL1Q08397 574 aaPredicted RBP7.98□□□□□ -1.13
VPS13B-212ENST00000524330 GAMTQ14353 236 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 TMEM249Q2WGJ8 235 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
VPS13B-212ENST00000524330 C10orf55Q5SWW7 151 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 ACSM6Q6P461 480 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 SPSB3Q6PJ21 355 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 TMEM170AQ8WVE7 144 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 SSMEM1Q8WWF3 244 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 ARPC1AQ92747 370 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 MBD6Q96DN6 1003 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 RITA1Q96K30 269 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 MGST2Q99735 147 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 TPSG1Q9NRR2 321 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 GNG13Q9P2W3 67 aa7.98□□□□□ -1.13
VPS13B-212ENST00000524330 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms