RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CMC4P56277 68 aaPredicted RBP18.98■□□□□ 0.63
PVT1-219ENST00000523427 SFXN4Q6P4A7 337 aa18.98■□□□□ 0.63
PVT1-219ENST00000523427 OR5H6Q8NGV6 325 aa18.98■□□□□ 0.63
PVT1-219ENST00000523427 CMTM3Q96MX0 182 aa18.98■□□□□ 0.63
PVT1-219ENST00000523427 C11orf68Q9H3H3 251 aaKnown RBP18.98■□□□□ 0.63
PVT1-219ENST00000523427 NDUFA4L2Q9NRX3 87 aa18.98■□□□□ 0.63
PVT1-219ENST00000523427 COMMD9Q9P000 198 aa18.98■□□□□ 0.63
PVT1-219ENST00000523427 BLOC1S6Q9UL45 172 aa18.98■□□□□ 0.63
PVT1-219ENST00000523427 VPS13DQ5THJ4 4388 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 MARCH11A6NNE9 402 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 NUPL2O15504 423 aaKnown RBP18.97■□□□□ 0.63
PVT1-219ENST00000523427 XRCC3O43542 346 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 LPAR6P43657 344 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 HERV-K104P61576 105 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 MXD1Q05195 221 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 SLC25A46Q96AG3 418 aa18.97■□□□□ 0.63
PVT1-219ENST00000523427 MRPS14O60783 128 aaKnown RBP18.96■□□□□ 0.63
PVT1-219ENST00000523427 SNAPC5O75971 98 aa18.96■□□□□ 0.63
PVT1-219ENST00000523427 IGHV3-48P01763 117 aa18.96■□□□□ 0.63
PVT1-219ENST00000523427 RLN1P04808 185 aa18.96■□□□□ 0.63
PVT1-219ENST00000523427 PSMB9P28065 219 aa18.96■□□□□ 0.63
PVT1-219ENST00000523427 G6PCP35575 357 aa18.96■□□□□ 0.63
PVT1-219ENST00000523427 RELQ04864 619 aaPredicted RBP18.96■□□□□ 0.63
PVT1-219ENST00000523427 MISP3Q96FF7 219 aa18.96■□□□□ 0.63
PVT1-219ENST00000523427 CLEC2LP0C7M8 214 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 GNRHRP30968 328 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 TMEM187Q14656 261 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 LEMD1Q68G75 181 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 TSPAN14Q8NG11 270 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 GIMAP1Q8WWP7 306 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 FCAMRQ8WWV6 532 aa18.95■□□□□ 0.62
PVT1-219ENST00000523427 TRAV14DV4A0A0A6YYC5 116 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 IDNKQ5T6J7 187 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 TCF24Q7RTU0 167 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 TPRA1Q86W33 373 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 OR5AP2Q8NGF4 316 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 SLC25A38Q96DW6 304 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 ZNF414Q96IQ9 312 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 ATP6V0BQ99437 205 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 APLNQ9ULZ1 77 aa18.94■□□□□ 0.62
PVT1-219ENST00000523427 FGF2P09038 288 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 F2RP25116 425 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 FGF9P31371 208 aaPredicted RBP18.93■□□□□ 0.62
PVT1-219ENST00000523427 SDC2P34741 201 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 PAFAH1B2P68402 229 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 TMEM56Q96MV1 263 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 AUNIPQ9H7T9 357 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 EHFQ9NZC4 300 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 SSR3Q9UNL2 185 aa18.93■□□□□ 0.62
PVT1-219ENST00000523427 IGHV3-66A0A0C4DH42 116 aa18.92■□□□□ 0.62
PVT1-219ENST00000523427 PGLYRP1O75594 196 aaPredicted RBP18.92■□□□□ 0.62
PVT1-219ENST00000523427 MFAP4P55083 255 aa18.92■□□□□ 0.62
PVT1-219ENST00000523427 DEFB131AP59861 70 aa18.92■□□□□ 0.62
PVT1-219ENST00000523427 RPL11P62913 178 aaKnown RBP18.92■□□□□ 0.62
PVT1-219ENST00000523427 DBX1A6NMT0 343 aa18.91■□□□□ 0.62
PVT1-219ENST00000523427 DNASE2O00115 360 aaPredicted RBP18.91■□□□□ 0.62
PVT1-219ENST00000523427 EIF4EP06730 217 aaKnown RBP18.91■□□□□ 0.62
PVT1-219ENST00000523427 TCTAP57738 103 aa18.91■□□□□ 0.62
PVT1-219ENST00000523427 FAM90A2PQ658T7 463 aa18.91■□□□□ 0.62
PVT1-219ENST00000523427 PINX1Q96BK5 328 aaKnown RBP18.91■□□□□ 0.62
PVT1-219ENST00000523427 RFX2P48378 723 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 IZUMO2Q6UXV1 221 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 OR1P1Q8NH06 330 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 ST8SIA2Q92186 375 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 DGCR14Q96DF8 476 aaKnown RBP18.9■□□□□ 0.62
PVT1-219ENST00000523427 OR10C1Q96KK4 312 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 ZNF2Q9BSG1 426 aaPredicted RBP18.9■□□□□ 0.62
PVT1-219ENST00000523427 RNF167Q9H6Y7 350 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 IFT46Q9NQC8 304 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 DIABLOQ9NR28 239 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 PRNDQ9UKY0 176 aa18.9■□□□□ 0.62
PVT1-219ENST00000523427 ST8SIA3O43173 380 aa18.89■□□□□ 0.61
PVT1-219ENST00000523427 APOHP02749 345 aaPredicted RBP18.89■□□□□ 0.61
PVT1-219ENST00000523427 LILRB2Q8N423 598 aa18.89■□□□□ 0.61
PVT1-219ENST00000523427 BORCS5Q969J3 196 aa18.89■□□□□ 0.61
PVT1-219ENST00000523427 NXF2Q9GZY0 626 aaKnown RBP18.89■□□□□ 0.61
PVT1-219ENST00000523427 I3L2K1 104 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 GNG7O60262 68 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 MT-CO2P00403 227 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 PMP2P02689 132 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 UBE2UQ5VVX9 321 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 FAM24BQ8N5W8 94 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 MS4A6AQ9H2W1 248 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 FKBP11Q9NYL4 201 aa18.88■□□□□ 0.61
PVT1-219ENST00000523427 DFFBO76075 338 aa18.87■□□□□ 0.61
PVT1-219ENST00000523427 HLA-DMBP28068 263 aa18.87■□□□□ 0.61
PVT1-219ENST00000523427 CBX5P45973 191 aa18.87■□□□□ 0.61
PVT1-219ENST00000523427 STHQ8IWL8 128 aa18.87■□□□□ 0.61
PVT1-219ENST00000523427 RABAC1Q9UI14 185 aa18.87■□□□□ 0.61
PVT1-219ENST00000523427 DNAH6Q9C0G6 4158 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 IGHV4-28A0A0C4DH34 117 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 C15orf61A6NNL5 157 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 C11orf94C9JXX5 98 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 TOMM20LQ6UXN7 152 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 CMTM1Q8IZ96 169 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 SPARTQ8N0X7 666 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 Q8NAQ8 132 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 MOB3AQ96BX8 217 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 GINS3Q9BRX5 216 aa18.86■□□□□ 0.61
PVT1-219ENST00000523427 A0A0A6YYH2 397 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms