RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 DAPK2Q9UIK4 370 aa16.58■□□□□ 0.24
PVT1-218ENST00000523328 MUC4Q99102 2169 aa16.57■□□□□ 0.24
PVT1-218ENST00000523328 DNAH17Q9UFH2 4485 aa16.57■□□□□ 0.24
PVT1-218ENST00000523328 MRPS14O60783 128 aaKnown RBP16.57■□□□□ 0.24
PVT1-218ENST00000523328 HINT2Q9BX68 163 aa16.57■□□□□ 0.24
PVT1-218ENST00000523328 RHBDL2Q9NX52 303 aa16.57■□□□□ 0.24
PVT1-218ENST00000523328 RELQ04864 619 aaPredicted RBP16.56■□□□□ 0.24
PVT1-218ENST00000523328 TMEM187Q14656 261 aa16.56■□□□□ 0.24
PVT1-218ENST00000523328 TMEM17Q86X19 198 aa16.56■□□□□ 0.24
PVT1-218ENST00000523328 GBGT1Q8N5D6 347 aa16.56■□□□□ 0.24
PVT1-218ENST00000523328 GIMAP1Q8WWP7 306 aa16.56■□□□□ 0.24
PVT1-218ENST00000523328 TXNL4BQ9NX01 149 aaKnown RBP16.56■□□□□ 0.24
PVT1-218ENST00000523328 NSG2Q9Y328 171 aa16.56■□□□□ 0.24
PVT1-218ENST00000523328 A0A1B0GVY2 172 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 C11orf94C9JXX5 98 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 GNRHRP30968 328 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 FGF9P31371 208 aaPredicted RBP16.55■□□□□ 0.24
PVT1-218ENST00000523328 ERVK-16P61578 105 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 LINC00336Q6ZUF6 198 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 Q8NAQ8 132 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 HRH4Q9H3N8 390 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 OR51B2Q9Y5P1 312 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 AGRNO00468 2067 aa16.55■□□□□ 0.24
PVT1-218ENST00000523328 TRAV18A0A075B6X5 111 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 IGHV3OR16-13A0A075B7E8 117 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 TRAV14DV4A0A0A6YYC5 116 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 IGHV3-74A0A0B4J1X5 117 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 C15orf61A6NNL5 157 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 NUPL2O15504 423 aaKnown RBP16.54■□□□□ 0.24
PVT1-218ENST00000523328 FCER2P06734 321 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 SFXN4Q6P4A7 337 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 TPRA1Q86W33 373 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 CADM3Q8N126 398 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 DGCR14Q96DF8 476 aaKnown RBP16.54■□□□□ 0.24
PVT1-218ENST00000523328 SLC25A38Q96DW6 304 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 CMTM3Q96MX0 182 aa16.54■□□□□ 0.24
PVT1-218ENST00000523328 RRP15Q9Y3B9 282 aaKnown RBP16.54■□□□□ 0.24
PVT1-218ENST00000523328 DYNC1H1Q14204 4646 aaKnown RBP16.54■□□□□ 0.24
PVT1-218ENST00000523328 YIF1AO95070 293 aa16.53■□□□□ 0.24
PVT1-218ENST00000523328 F2RP25116 425 aa16.53■□□□□ 0.24
PVT1-218ENST00000523328 TCF24Q7RTU0 167 aa16.53■□□□□ 0.24
PVT1-218ENST00000523328 OR1P1Q8NH06 330 aa16.53■□□□□ 0.24
PVT1-218ENST00000523328 NXF2Q9GZY0 626 aaKnown RBP16.53■□□□□ 0.24
PVT1-218ENST00000523328 DBX1A6NMT0 343 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 I3L2K1 104 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 XRCC3O43542 346 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 KRASP01116 189 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 LEMD1Q68G75 181 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 OR5AP2Q8NGF4 316 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 OR5H6Q8NGV6 325 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 FCAMRQ8WWV6 532 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 TMEM56Q96MV1 263 aa16.52■□□□□ 0.24
PVT1-218ENST00000523328 RLN1P04808 185 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 RBMY1A1P0DJD3 496 aaKnown RBP16.51■□□□□ 0.23
PVT1-218ENST00000523328 RBMY1CP0DJD4 496 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 G6PCP35575 357 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 LPAR6P43657 344 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 DEFB131AP59861 70 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 PAFAH1B2P68402 229 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 RBMY1FQ15415 496 aaKnown RBP16.51■□□□□ 0.23
PVT1-218ENST00000523328 LILRB2Q8N423 598 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 SLC25A46Q96AG3 418 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 TXN2Q99757 166 aa16.51■□□□□ 0.23
PVT1-218ENST00000523328 DNAH11Q96DT5 4516 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 PGLYRP1O75594 196 aaPredicted RBP16.5■□□□□ 0.23
PVT1-218ENST00000523328 SNAPC5O75971 98 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 DFFBO76075 338 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 GIG44P09565 113 aaPredicted RBP16.5■□□□□ 0.23
PVT1-218ENST00000523328 MED14OSP0DP75 135 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 MFAP4P55083 255 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 FAM24BQ8N5W8 94 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 ST8SIA2Q92186 375 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 BORCS5Q969J3 196 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 MS4A6AQ9H2W1 248 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 VSIRQ9H7M9 311 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 AUNIPQ9H7T9 357 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 TMEM14BQ9NUH8 114 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 PRNDQ9UKY0 176 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 BLOC1S6Q9UL45 172 aa16.5■□□□□ 0.23
PVT1-218ENST00000523328 ABCA13Q86UQ4 5058 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 IGHV4-28A0A0C4DH34 117 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 APOHP02749 345 aaPredicted RBP16.49■□□□□ 0.23
PVT1-218ENST00000523328 CD5P06127 495 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 HLA-DMBP28068 263 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 SCAND1P57086 179 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 HERV-K104P61576 105 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 MISP3Q96FF7 219 aa16.49■□□□□ 0.23
PVT1-218ENST00000523328 IGHV4-4A0A075B6R2 117 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 A0A0A6YYH2 397 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 A6NJ64 397 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 IGHV3-48P01763 117 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 UBE2UQ5VVX9 321 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 Q6ZTC4 211 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 FKBP11Q9NYL4 201 aa16.48■□□□□ 0.23
PVT1-218ENST00000523328 TRAV2A0A0B4J234 112 aa16.47■□□□□ 0.23
PVT1-218ENST00000523328 TRAV10A0A0B4J240 114 aa16.47■□□□□ 0.23
PVT1-218ENST00000523328 MEIS3P1A6NDR6 274 aa16.47■□□□□ 0.23
PVT1-218ENST00000523328 ST8SIA3O43173 380 aa16.47■□□□□ 0.23
PVT1-218ENST00000523328 MT-CO2P00403 227 aa16.47■□□□□ 0.23
PVT1-218ENST00000523328 SDC2P34741 201 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms