RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 RNF224P0DH78 156 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 RNASE2P10153 161 aaKnown RBP5.51□□□□□ -1.53
CSMD1-211ENST00000523062 MAS1LP35410 378 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 LMO4P61968 165 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 ERHP84090 104 aaKnown RBP5.51□□□□□ -1.53
CSMD1-211ENST00000523062 DEFA5Q01523 94 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 KLRD1Q13241 179 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 BSXQ3C1V8 233 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 ACOT6Q3I5F7 207 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-211ENST00000523062 C2orf83Q53S99 150 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 FFAR4Q5NUL3 377 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 C10orf91Q5T1B1 145 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 MINOS1Q5TGZ0 78 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 MMD2Q8IY49 270 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 SVBPQ8N300 66 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 TMEM170AQ8WVE7 144 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 MBD3L1Q8WWY6 194 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 RCC1LQ96I51 464 aaKnown RBP5.51□□□□□ -1.53
CSMD1-211ENST00000523062 PIMREGQ9BSJ6 248 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 SEC11CQ9BY50 192 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 EIF5A2Q9GZV4 153 aaKnown RBP5.51□□□□□ -1.53
CSMD1-211ENST00000523062 SIRPDQ9H106 197 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 SMDT1Q9H4I9 107 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 ZNF430Q9H8G1 570 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-211ENST00000523062 MINOS1-NBL1R4GNA1 71 aa5.51□□□□□ -1.53
CSMD1-211ENST00000523062 CTXND1A0A1B0GTU2 59 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 MAP1LC3B2A6NCE7 125 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 RBFOX3A6NFN3 312 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 FAM157AC9JC47 383 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 NDUFS8O00217 210 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 TIMM23O14925 209 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 SCO1O75880 301 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ACTL6BO94805 426 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 IFNA1P01562 189 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 OPN1MWP04001 364 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 CRYGBP07316 175 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 OPN1MW2P0DN77 364 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 OPN1MW3P0DN78 364 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 COX6B1P14854 86 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ADCYAP1P18509 176 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 M6PRP20645 277 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ZFP36P26651 326 aaKnown RBP5.5□□□□□ -1.53
CSMD1-211ENST00000523062 OPRK1P41145 380 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 RPL27AP46776 148 aaKnown RBP5.5□□□□□ -1.53
CSMD1-211ENST00000523062 PPT1P50897 306 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 LCN2P80188 198 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 PAX2Q02962 417 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 PRB3Q04118 309 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-211ENST00000523062 RAB31Q13636 194 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 PSG5Q15238 335 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ZNF726P1Q15940 193 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 PRSS8Q16651 343 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ZNF506Q5JVG8 444 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 SP5Q6BEB4 398 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-211ENST00000523062 HCP5Q6MZN7 132 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 CCDC144NLQ6NUI1 221 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 VMO1Q7Z5L0 202 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 SCRT1Q9BWW7 348 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 GGTLC1Q9BX51 225 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 ACTR3CQ9C0K3 210 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-211ENST00000523062 MAP1LC3BQ9GZQ8 125 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 SLC35B3Q9H1N7 401 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 VSIRQ9H7M9 311 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 NPVFQ9HCQ7 196 aa5.5□□□□□ -1.53
CSMD1-211ENST00000523062 FASNP49327 2511 aaKnown RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TET2Q6N021 2002 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 LOC102723971A0A1B0GUV8 181 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 CGB1A6NKQ9 187 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SEC14L6B5MCN3 397 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 VENTXO95231 258 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SNAPINO95295 136 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 IGKV1D-33P01593 117 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 IGKV1-33P01594 117 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 BCL2P10415 239 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TAGLN2P37802 199 aaKnown RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 CDC34P49427 236 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SUB1P53999 127 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 ATP5J2P56134 94 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 LGALS4P56470 323 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 CCL20P78556 96 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 HABP2Q14520 560 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 HNF4GQ14541 408 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TNXAQ16473 311 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 KHDC3LQ587J8 217 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 C10orf55Q5SWW7 151 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 FAM122CQ6P4D5 195 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TEPPQ6URK8 271 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 CLEC2AQ6UVW9 174 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 LCN15Q6UWW0 184 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SLC16A13Q7RTY0 426 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TMEM144Q7Z5S9 345 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 OR10G4Q8NGN3 311 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 OR10G9Q8NGN4 311 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 OR10G7Q8NGN6 311 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 RNASEH2CQ8TDP1 164 aaKnown RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 C10orf105Q8TEF2 133 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 CACNG8Q8WXS5 425 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 CFHR4Q92496 578 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 RITA1Q96K30 269 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms