RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 C1orf159Q96HA4 380 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
SPARC-205ENST00000522348 FBXL15Q9H469 300 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 TREM1Q9NP99 234 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 C1RLQ9NZP8 487 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 LRBAP50851 2863 aa7.76□□□□□ -1.17
SPARC-205ENST00000522348 TRAV20A0A0B4J274 112 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 AGPAT2O15120 278 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 CNIH1O95406 144 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 MSMBP08118 114 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 M6PRP20645 277 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 RPL29P47914 159 aaKnown RBP7.75□□□□□ -1.17
SPARC-205ENST00000522348 WT1-ASQ06250 92 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 CD69Q07108 199 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 PMS2P11Q13670 270 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 HNF4GQ14541 408 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 GUK1Q16774 197 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
SPARC-205ENST00000522348 PVRIGQ6DKI7 326 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 SPSB3Q6PJ21 355 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 TMEM144Q7Z5S9 345 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 ZNF114Q8NC26 417 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 OR1L6Q8NGR2 347 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 NRGNQ92686 78 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 NARS2Q96I59 477 aaKnown RBP7.75□□□□□ -1.17
SPARC-205ENST00000522348 LINC00052Q96N35 136 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 P2RX4Q99571 388 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 EIF5A2Q9GZV4 153 aaKnown RBP7.75□□□□□ -1.17
SPARC-205ENST00000522348 TPSG1Q9NRR2 321 aa7.75□□□□□ -1.17
SPARC-205ENST00000522348 LSM4Q9Y4Z0 139 aaKnown RBP7.75□□□□□ -1.17
SPARC-205ENST00000522348 IGHV1-69DA0A0B4J2H0 117 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 RBFOX3A6NFN3 312 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 CORTO00230 105 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 FCN1O00602 326 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 IGHV1-69P01742 117 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 TMEM11P17152 192 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 SAA4P35542 130 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 ELLP55199 621 aaPredicted RBP7.74□□□□□ -1.17
SPARC-205ENST00000522348 GNB1P62873 340 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
SPARC-205ENST00000522348 AKR1C1Q04828 323 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 C5orf64Q2M2E5 130 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 DEFB113Q30KQ7 82 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 C10orf55Q5SWW7 151 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 ACSM6Q6P461 480 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 ZNF562Q6V9R5 426 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 DYNAPQ8N1N2 210 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 RPP25LQ8N5L8 163 aaKnown RBP7.74□□□□□ -1.17
SPARC-205ENST00000522348 Q8N6K4 173 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 LINC01356Q8N9X3 169 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 AJUBAQ96IF1 538 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 SLC35E1Q96K37 410 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 SEC11CQ9BY50 192 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
SPARC-205ENST00000522348 DOCK11Q5JSL3 2073 aa7.74□□□□□ -1.17
SPARC-205ENST00000522348 CTXND1A0A1B0GTU2 59 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 IGLC7A0M8Q6 106 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 NCBP2LA6PVI3 153 aaKnown RBP7.73□□□□□ -1.17
SPARC-205ENST00000522348 F8W036 122 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 CCL20P78556 96 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 LOXL1Q08397 574 aaPredicted RBP7.73□□□□□ -1.17
SPARC-205ENST00000522348 GAMTQ14353 236 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 FXYD3Q14802 87 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 C10orf91Q5T1B1 145 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 RBMS3Q6XE24 437 aaKnown RBP7.73□□□□□ -1.17
SPARC-205ENST00000522348 CCDC28AQ8IWP9 274 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 SRSF12Q8WXF0 261 aaKnown RBP7.73□□□□□ -1.17
SPARC-205ENST00000522348 RCC1LQ96I51 464 aaKnown RBP7.73□□□□□ -1.17
SPARC-205ENST00000522348 MGST2Q99735 147 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 C19orf24Q9BVV8 132 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 SCRT1Q9BWW7 348 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 MEGF9Q9H1U4 602 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 C7orf69Q9H7B7 122 aa7.73□□□□□ -1.17
SPARC-205ENST00000522348 FLNCQ14315 2725 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 A0A1W2PPV4 95 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 MAP1LC3B2A6NCE7 125 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 SEC14L6B5MCN3 397 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 TEX22C9J3V5 150 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 J3QLI3 93 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 IFNA1P01562 189 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 APOC3P02656 99 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 CD24P25063 80 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 TAGLN2P37802 199 aaKnown RBP7.72□□□□□ -1.17
SPARC-205ENST00000522348 BPIFB3P59826 476 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 ZNF726P1Q15940 193 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 MLANAQ16655 118 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 TMEM249Q2WGJ8 235 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 LCN15Q6UWW0 184 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 PRSS57Q6UWY2 283 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 SLC16A13Q7RTY0 426 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 PIP4P2Q8N4L2 257 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 C17orf50Q8WW18 174 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 SSMEM1Q8WWF3 244 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 MBD6Q96DN6 1003 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 RASL11BQ9BPW5 248 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 GGTLC1Q9BX51 225 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 MAP1LC3BQ9GZQ8 125 aa7.72□□□□□ -1.17
SPARC-205ENST00000522348 SLC35B3Q9H1N7 401 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms