RNA–Protein interactions for RNA: ENST00000521767.1

UBR5-211, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-211	ENST00000521767	FXYD3	Q14802	87 aa		10.65	□□□□□ -0.7
UBR5-211	ENST00000521767	AANAT	Q16613	207 aa		10.65	□□□□□ -0.7
UBR5-211	ENST00000521767	C2orf83	Q53S99	150 aa		10.65	□□□□□ -0.7
UBR5-211	ENST00000521767	BCL6B	Q8N143	479 aa	Predicted RBP	10.65	□□□□□ -0.7
UBR5-211	ENST00000521767	RBM14	Q96PK6	669 aa	Known RBP	10.65	□□□□□ -0.7
UBR5-211	ENST00000521767	TLN2	Q9Y4G6	2542 aa		10.65	□□□□□ -0.71
UBR5-211	ENST00000521767	TEX22	C9J3V5	150 aa		10.65	□□□□□ -0.71
UBR5-211	ENST00000521767	CX3CL1	P78423	397 aa		10.65	□□□□□ -0.71
UBR5-211	ENST00000521767	EIF5AL1	Q6IS14	154 aa	Known RBP	10.65	□□□□□ -0.71
UBR5-211	ENST00000521767	TMED6	Q8WW62	240 aa		10.65	□□□□□ -0.71
UBR5-211	ENST00000521767	RASL11B	Q9BPW5	248 aa		10.65	□□□□□ -0.71
UBR5-211	ENST00000521767	PRSS46	E5RG02	174 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767		H3BUX3	64 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	FBXO24	O75426	580 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	SUB1	P53999	127 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	TUSC1	Q2TAM9	212 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	DEFB112	Q30KQ8	113 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	SLC25A24	Q6NUK1	477 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	C9orf139	Q6ZV77	190 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	TMEM219	Q86XT9	240 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	HSD17B11	Q8NBQ5	300 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	C22orf15	Q8WYQ4	148 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	P2RX4	Q99571	388 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	SRSF8	Q9BRL6	282 aa	Known RBP	10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	TMEM147	Q9BVK8	224 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	GGACT	Q9BVM4	153 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	UQCC1	Q9NVA1	299 aa		10.64	□□□□□ -0.71
UBR5-211	ENST00000521767	NOTCH2	Q04721	2471 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	HLA-DRB1	P01911	266 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	REG1A	P05451	166 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	APELA	P0DMC3	54 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	AREG	P15514	252 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	VWC2	Q2TAL6	325 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	SCGB1C1	Q8TD33	95 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	SSMEM1	Q8WWF3	244 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	SLC25A33	Q9BSK2	321 aa		10.63	□□□□□ -0.71
UBR5-211	ENST00000521767	MDFIC2	A0A1B0GVS7	189 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767		A6NDX4	124 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	SEC11B	P0C7V7	166 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	SPP1	P10451	314 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	ACAN	P16112	2415 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	ATP6V0C	P27449	155 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	RAB14	P61106	215 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	DLK1	P80370	383 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	FAM74A1	Q5RGS3	127 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	ARPC1A	Q92747	370 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	WDR61	Q9GZS3	305 aa	Known RBP	10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	SH3BGRL3	Q9H299	93 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	SLC25A32	Q9H2D1	315 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	MOB4	Q9Y3A3	225 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	IGHV7-81	A0A0B4J1V7	117 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	UBE2L5P	A0A1B0GUS4	154 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	FGF16	O43320	207 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	KRTAP1-1	Q07627	177 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	LY6E	Q16553	131 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	TEX29	Q8N6K0	151 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	C5orf56	Q8N8D9	126 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	ZNF114	Q8NC26	417 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	ABHD5	Q8WTS1	349 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	PITPNC1	Q9UKF7	332 aa		10.62	□□□□□ -0.71
UBR5-211	ENST00000521767	OTOG	Q6ZRI0	2925 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	CD5L	O43866	347 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	RUNX1	Q01196	453 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	CLLU1	Q5K131	121 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	OR1P1	Q8NH06	330 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	PCNP	Q8WW12	178 aa	Known RBP	10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	TAF15	Q92804	592 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	FAM103A1	Q9BTL3	118 aa	Known RBP	10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	PLA2G2E	Q9NZK7	142 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	RFNG	Q9Y644	331 aa		10.61	□□□□□ -0.71
UBR5-211	ENST00000521767	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	AMY1A	P04745	511 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	FAM157C	P0CG43	387 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	EGR2	P11161	476 aa	Predicted RBP	10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	MDK	P21741	143 aa	Predicted RBP	10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	IER3	P46695	156 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	NDP	Q00604	133 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	PVRIG	Q6DKI7	326 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	OR2G3	Q8NGZ4	309 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	RNF141	Q8WVD5	230 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	HSPB9	Q9BQS6	159 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	NPVF	Q9HCQ7	196 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	F11R	Q9Y624	299 aa	Known RBP	10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	SMCO3	A2RU48	225 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	FNDC10	F2Z333	226 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	IGHV4-59	P01825	116 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	NMB	P08949	121 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	CTRB1	P17538	263 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	GPX4	P36969	197 aa	Predicted RBP	10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	SULT1A2	P50226	295 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	MFAP2	P55001	183 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	CD69	Q07108	199 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	MLANA	Q16655	118 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.6	□□□□□ -0.71
UBR5-211	ENST00000521767	CTRB2	Q6GPI1	263 aa		10.6	□□□□□ -0.71
UBR5-211	ENST00000521767		Q6YL49	198 aa		10.6	□□□□□ -0.71

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