RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 HOXD3P31249 432 aaPredicted RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 SPCS3P61009 180 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 SPSB3Q6PJ21 355 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 CCR6P51684 374 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 DEFB136Q30KP8 78 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 C15orf32Q32M92 178 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 NMSQ5H8A3 153 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 TRIQKQ629K1 86 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 IL34Q6ZMJ4 242 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 LGI3Q8N145 548 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 DLX4Q92988 240 aaPredicted RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 ZNF355PQ9NSJ1 428 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 PEMTQ9UBM1 199 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 CENPXA8MT69 81 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 SEC14L6B5MCN3 397 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 FAM90A26D6RGX4 464 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 BMPR1BO00238 502 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 NDUFB8O95169 186 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 DEFA6Q01524 100 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 BAK1Q16611 211 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 OXLD1Q5BKU9 147 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 FAAP20Q6NZ36 180 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
CLK4-209ENST00000521621 CCDC140Q96MF4 163 aa7.25□□□□□ -1.25
CLK4-209ENST00000521621 A0A1B0GU03 582 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 IGLV1-51P01701 117 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 IL7P13232 177 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 KRTAP10-11P60412 298 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 ERHP84090 104 aaKnown RBP7.24□□□□□ -1.25
CLK4-209ENST00000521621 OR9G4Q8NGQ1 327 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 LHFPL5Q8TAF8 219 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 BSCL2Q96G97 398 aaPredicted RBP7.24□□□□□ -1.25
CLK4-209ENST00000521621 PKD1L1Q8TDX9 2849 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 SFT2D2O95562 160 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 C8orf88P0DMB2 117 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 OR13C7P0DN81 318 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 PI3P19957 117 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 TRIM16LQ309B1 348 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 NOXA1Q86UR1 476 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 MARC2Q969Z3 335 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 PLEKHA3Q9HB20 300 aa7.24□□□□□ -1.25
CLK4-209ENST00000521621 DBX1A6NMT0 343 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 A8MZ25 164 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 I3L2K1 104 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 ST8SIA3O43173 380 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 PITX3O75364 302 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 OR2J3O76001 311 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 MYOD1P15172 320 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 BTCP35070 178 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 SUB1P53999 127 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLK4-209ENST00000521621 SLURP1P55000 103 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 WDR12Q9GZL7 423 aaKnown RBP7.23□□□□□ -1.25
CLK4-209ENST00000521621 MCUBQ9NWR8 336 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 TECRQ9NZ01 308 aaKnown RBP7.23□□□□□ -1.25
CLK4-209ENST00000521621 HSPB7Q9UBY9 170 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 TMED3Q9Y3Q3 217 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 K7EIM0 57 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 K7EMT4 169 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 DEFA4P12838 97 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 AKR1C2P52895 323 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 MFAP2P55001 183 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 C2orf83Q53S99 150 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 OR10W1Q8NGF6 305 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 GPR146Q96CH1 333 aa7.23□□□□□ -1.25
CLK4-209ENST00000521621 IGHV3-11P01762 117 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 CSN3P07498 182 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 SULT1A3P0DMM9 295 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 SULT1A4P0DMN0 295 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 RPEL1Q2QD12 228 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 TMEM268Q5VZI3 342 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 CENPSQ8N2Z9 138 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 DUX3Q96PT4 197 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 PDCD10Q9BUL8 212 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 ZC4H2Q9NQZ6 224 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 MEGF8Q7Z7M0 2845 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 VWFP04275 2813 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 A0A0G2JRQ6 117 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 HTR2BP41595 481 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 INPP1P49441 399 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 SMCO1Q147U7 214 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 SP6Q3SY56 376 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 ZNF57Q68EA5 555 aaPredicted RBP7.22□□□□□ -1.25
CLK4-209ENST00000521621 Q6ZRM9 215 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 SLC35G3Q8N808 338 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 RNASEH2CQ8TDP1 164 aaKnown RBP7.22□□□□□ -1.25
CLK4-209ENST00000521621 PALMDQ9NP74 551 aa7.22□□□□□ -1.25
CLK4-209ENST00000521621 ZNF256Q9Y2P7 627 aaPredicted RBP7.22□□□□□ -1.25
CLK4-209ENST00000521621 F8W735 103 aaPredicted RBP7.21□□□□□ -1.25
CLK4-209ENST00000521621 NDUFA4O00483 81 aa7.21□□□□□ -1.25
CLK4-209ENST00000521621 PLA2G10O15496 165 aa7.21□□□□□ -1.25
CLK4-209ENST00000521621 RNASE2P10153 161 aaKnown RBP7.21□□□□□ -1.25
CLK4-209ENST00000521621 ARL3P36405 182 aa7.21□□□□□ -1.25
CLK4-209ENST00000521621 ASAH1Q13510 395 aa7.21□□□□□ -1.25
CLK4-209ENST00000521621 ZNF846Q147U1 533 aa7.21□□□□□ -1.25
CLK4-209ENST00000521621 CASTOR1Q8WTX7 329 aa7.21□□□□□ -1.25
CLK4-209ENST00000521621 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.25
CLK4-209ENST00000521621 TRAV25A0A0B4J276 109 aa7.21□□□□□ -1.26
CLK4-209ENST00000521621 TGOLN2O43493 480 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms