RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 IFITM2Q01629 132 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 AESQ08117 197 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 KCNJ8Q15842 424 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 IMPG1Q17R60 797 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 LINC00471Q8N535 108 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 WFDC11Q8NEX6 87 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 MCFD2Q8NI22 146 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 ITFG2Q969R8 447 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 TMEM106AQ96A25 262 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 OR52E6Q96RD3 313 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 CISHQ9NSE2 258 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 MED9Q9NWA0 146 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 IL36BQ9NZH7 164 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 EIF4G1Q04637 1599 aaKnown RBP0.86□□□□□ -2.27
SKP1-207ENST00000520417 FREM1Q5H8C1 2179 aa0.86□□□□□ -2.27
SKP1-207ENST00000520417 TRBV10-2A0A0K0K1G8 114 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 IRGMA1A4Y4 181 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 OR4C46A6NHA9 309 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 CLDN24A6NM45 220 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 FAAHO00519 579 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 E2F6O75461 281 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 NFYAP23511 347 aaPredicted RBP0.85□□□□□ -2.27
SKP1-207ENST00000520417 CDKN2CP42773 168 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 EVX1P49640 407 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 OR2F1Q13607 317 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 ACOT6Q3I5F7 207 aaPredicted RBP0.85□□□□□ -2.27
SKP1-207ENST00000520417 AADACL3Q5VUY0 350 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 SPOPLQ6IQ16 392 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 DPPA3Q6W0C5 159 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 DYNAPQ8N1N2 210 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 LRRC25Q8N386 305 aaPredicted RBP0.85□□□□□ -2.27
SKP1-207ENST00000520417 CLDN22Q8N7P3 220 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 ZNF565Q8N9K5 539 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 NAV1Q8NEY1 1877 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 DNAJC9Q8WXX5 260 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 C8orf76Q96K31 380 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 GINS4Q9BRT9 223 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 OR8D2Q9GZM6 311 aa0.85□□□□□ -2.27
SKP1-207ENST00000520417 WDR61Q9GZS3 305 aaKnown RBP0.85□□□□□ -2.27
SKP1-207ENST00000520417 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.85□□□□□ -2.27
SKP1-207ENST00000520417 SCAF11Q99590 1463 aaKnown RBP0.85□□□□□ -2.27
SKP1-207ENST00000520417 WDR90Q96KV7 1748 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 DCCP43146 1447 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 TRAV9-1A0A075B6T8 112 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 IGKV2D-26A0A0A0MRZ7 120 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 IBA57-AS1B1ANH7 110 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 TRAPPC2LH3BP13 241 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 IGHV3-7P01780 117 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 PMP2P02689 132 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 C1QAP02745 245 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 S100A6P06703 90 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 SERPINA6P08185 405 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 METTL15P1P0C7V9 234 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 ANP32AP39687 249 aaKnown RBP0.84□□□□□ -2.27
SKP1-207ENST00000520417 FXYD2P54710 66 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 CCL20P78556 96 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 MRPS25P82663 173 aaKnown RBP0.84□□□□□ -2.27
SKP1-207ENST00000520417 STX5Q13190 355 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 RGS21Q2M5E4 152 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 IBA57Q5T440 356 aaKnown RBP0.84□□□□□ -2.27
SKP1-207ENST00000520417 RPL22L1Q6P5R6 122 aaKnown RBP0.84□□□□□ -2.27
SKP1-207ENST00000520417 ALKAL1Q6UXT8 129 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 AAED1Q7RTV5 226 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 TMEM86BQ8N661 226 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 ZNF439Q8NDP4 499 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 SERPINI1Q99574 410 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 CCDC90BQ9GZT6 254 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 PRTFDC1Q9NRG1 225 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 FBXL12Q9NXK8 326 aa0.84□□□□□ -2.27
SKP1-207ENST00000520417 PTPRBP23467 1997 aa0.84□□□□□ -2.28
SKP1-207ENST00000520417 CCDC88CQ9P219 2028 aa0.84□□□□□ -2.28
SKP1-207ENST00000520417 MYO3BQ8WXR4 1341 aa0.84□□□□□ -2.28
SKP1-207ENST00000520417 NUMA1Q14980 2115 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 PCDH15Q96QU1 1955 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 SIPA1L1O43166 1804 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HEATR5AQ86XA9 2040 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 A0A087WUJ7 227 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 KPNA3O00505 521 aaPredicted RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 CHP2O43745 196 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 ATP5HO75947 161 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 TTRP02766 147 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H1TP22492 207 aaPredicted RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BOP23527 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BBP33778 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 RPL5P46777 297 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BDP58876 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 AP3S2P59780 193 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 RPS20P60866 119 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 SNRPD2P62316 118 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BCP62807 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 SUPT4H1P63272 117 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 PLCXD2Q0VAA5 305 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 CDK10Q15131 360 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 KISS1Q15726 138 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST2H2BEQ16778 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 SYPL2Q5VXT5 272 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 LPCAT3Q6P1A2 487 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 LCN15Q6UWW0 184 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 Q6ZS49 121 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms