RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 VSTM2AQ8TAG5 236 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 Q8WTZ3 238 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 C22orf15Q8WYQ4 148 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TVP23CQ96ET8 276 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ABHD14BQ96IU4 210 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 RHOVQ96L33 236 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 RNF5Q99942 180 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 RASL11BQ9BPW5 248 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 NICN1Q9BSH3 213 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 NDUFAF3Q9BU61 184 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 C20orf24Q9BUV8 137 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ST6GALNAC5Q9BVH7 336 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ACTR3CQ9C0K3 210 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 ANXA10Q9UJ72 324 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 RNF150Q9ULK6 438 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 PSG11Q9UQ72 335 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TCF19Q9Y242 345 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 MOB4Q9Y3A3 225 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 FBXO7Q9Y3I1 522 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 HILPDAQ9Y5L2 63 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 WNK2Q9Y3S1 2297 aa4.57□□□□□ -1.68
CTNNA1-220ENST00000520260 TRBV24-1A0A075B6N3 115 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 A0A1W2PRD5 423 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 A0A1W2PRF3 423 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 A0A1W2PRM7 423 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 SMCO3A2RU48 225 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 A8MWP6 167 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 C15orf65H3BRN8 121 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 TIMM23O14925 209 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 ACTL6BO94805 426 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 SCAF4O95104 1147 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 MOSP00540 346 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 HBE1P02100 147 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 MBPP02686 304 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 PRH1P02810 166 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 TFF1P04155 84 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 OR5AC1P0C628 307 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 RD3LP0DJH9 198 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 OR13C7P0DN81 318 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 PPP1CCP36873 323 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 THBS3P49746 956 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF137PP52743 207 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 UBE2KP61086 200 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 NUTF2P61970 127 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 PNRC1Q12796 327 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 KLRD1Q13241 179 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM187Q14656 261 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 C17orf58Q2M2W7 97 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 MORN2Q502X0 79 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 RUSC1-AS1Q66K80 236 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF880Q6PDB4 577 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 CRIP3Q6Q6R5 217 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 SHISA2Q6UWI4 295 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 C1orf229Q6ZS94 237 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF429Q86V71 674 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 PDPNQ86YL7 162 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 TCTEX1D1Q8N7M0 179 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 OR4X2Q8NGF9 303 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 OR10V1Q8NGI7 309 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 OR4P4Q8NGL7 312 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 RBMXL1Q96E39 390 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 BSCL2Q96G97 398 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 HSD17B10Q99714 261 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 CABLES2Q9BTV7 478 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 GPR61Q9BZJ8 451 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 SMIM3Q9BZL3 60 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 CTDSP1Q9GZU7 261 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 SLC25A31Q9H0C2 315 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 C11orf1Q9H5F2 150 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 NAA60Q9H7X0 242 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 PRR13Q9NZ81 148 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 EHFQ9NZC4 300 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 WASHC3Q9Y3C0 194 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 LSM5Q9Y4Y9 91 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 MMP24Q9Y5R2 645 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 PUS1Q9Y606 427 aaKnown RBP eCLIP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 SONP18583 2426 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 AKAP9Q99996 3911 aa4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 TEP1Q99973 2627 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-220ENST00000520260 IGHV1-3A0A0C4DH29 117 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 CLPSL1A2RUU4 121 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 NCBP2LA6PVI3 153 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ST8SIA3O43173 380 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 PITX3O75364 302 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 HRASP01112 189 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 GCGP01275 180 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OPN1MWP04001 364 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 TRGC1P0CF51 173 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OPN1MW2P0DN77 364 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OPN1MW3P0DN78 364 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 CGB3P0DN86 165 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 CGB7P0DN87 165 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 PI3P19957 117 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 VDAC2P45880 294 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 LGALS7P47929 136 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 UCP3P55916 312 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 LOXL3P58215 753 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ERVK-16P61578 105 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 RND3P61587 244 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms