RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CCL20P78556 96 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 HNF4GQ14541 408 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 OR10W1Q8NGF6 305 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 OR1L8Q8NGR8 309 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 GGACTQ9BVM4 153 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 TREM1Q9NP99 234 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 WDR83OSQ9Y284 106 aa11.6□□□□□ -0.55
CLN8-204ENST00000519254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.554e-15■■■■□ 21.5
CLN8-204ENST00000519254 A0A1B0GV50 99 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 CGB1A6NKQ9 187 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 J3QLI3 93 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 TIMM23O14925 209 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 SCO1O75880 301 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 IFNA4P05014 189 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 CRYGBP07316 175 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 ADCYAP1P18509 176 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 CNTFRP26992 372 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 DLK1P80370 383 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 MINOS1Q5TGZ0 78 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 TEX45Q8NA69 505 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
CLN8-204ENST00000519254 MINOS1-NBL1R4GNA1 71 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 A0A1B0GW64 132 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 ZNF726P1Q15940 193 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 ITPR3Q14573 2671 aa11.59□□□□□ -0.55
CLN8-204ENST00000519254 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 ELLP55199 621 aaPredicted RBP11.58□□□□□ -0.56
CLN8-204ENST00000519254 PSG5Q15238 335 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 GUK1Q16774 197 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
CLN8-204ENST00000519254 C10orf55Q5SWW7 151 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 TREML4Q6UXN2 200 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 SSX7Q7RTT5 188 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 LFNGQ8NES3 379 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 SFT2D1Q8WV19 159 aa11.58□□□□□ -0.56
CLN8-204ENST00000519254 TRAV1-1A0A0B4J248 108 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 APOC3P02656 99 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
CLN8-204ENST00000519254 CD24P25063 80 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 ARSJQ5FYB0 599 aaPredicted RBP11.57□□□□□ -0.56
CLN8-204ENST00000519254 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 CFHR4Q92496 578 aa11.57□□□□□ -0.56
CLN8-204ENST00000519254 RCC1LQ96I51 464 aaKnown RBP11.57□□□□□ -0.56
CLN8-204ENST00000519254 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 BTBD17A6NE02 478 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 VENTXO95231 258 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 ATP5IP56385 69 aaPredicted RBP11.56□□□□□ -0.56
CLN8-204ENST00000519254 RAB2AP61019 212 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 HABP2Q14520 560 aaPredicted RBP11.56□□□□□ -0.56
CLN8-204ENST00000519254 PRSS8Q16651 343 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 RPP25LQ8N5L8 163 aaKnown RBP11.56□□□□□ -0.56
CLN8-204ENST00000519254 MALSU1Q96EH3 234 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 RNF5Q99942 180 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 SIGLEC9Q9Y336 463 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
CLN8-204ENST00000519254 CREBBPQ92793 2442 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 MPDU1O75352 247 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 FFAR4Q5NUL3 377 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 ZNF709Q8N972 641 aa11.56□□□□□ -0.56
CLN8-204ENST00000519254 LSM4Q9Y4Z0 139 aaKnown RBP11.56□□□□□ -0.56
CLN8-204ENST00000519254 A0A1W2PN81 502 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 F8W036 122 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 HBE1P02100 147 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 CHRNA7P36544 502 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 ERHP84090 104 aaKnown RBP11.55□□□□□ -0.56
CLN8-204ENST00000519254 HES1Q14469 280 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 PEA15Q15121 130 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 ATRAIDQ6UW56 229 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 MMD2Q8IY49 270 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 MGST2Q99735 147 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 SEC11CQ9BY50 192 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
CLN8-204ENST00000519254 NPVFQ9HCQ7 196 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 KIAA1456Q9P272 454 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
CLN8-204ENST00000519254 AKAP9Q99996 3911 aa11.55□□□□□ -0.56
CLN8-204ENST00000519254 FNDC10F2Z333 226 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 C17orf112F2Z3M2 114 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 SNRNP70P08621 437 aaKnown RBP11.54□□□□□ -0.56
CLN8-204ENST00000519254 NANPQ8TBE9 248 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 C22orf15Q8WYQ4 148 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 RARRES2Q99969 163 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms