RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HIST1H1EP10412 219 aaKnown RBP1.26□□□□□ -2.21
SQLE-202ENST00000518604 S100A5P33763 92 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 G6PCP35575 357 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 ZNF80P51504 273 aaPredicted RBP1.26□□□□□ -2.21
SQLE-202ENST00000518604 OR2F1Q13607 317 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 GRK1Q15835 563 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 CHMP6Q96FZ7 201 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 LHFPL6Q9Y693 200 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 LAMB2P55268 1798 aa1.26□□□□□ -2.21
SQLE-202ENST00000518604 TONSLQ96HA7 1378 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 TRBV20OR9-2A0A075B6H5 130 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 A0A0J9YY10 115 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 A0A1B0GX78 115 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 FABP5P3A8MUU1 101 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 TMEM114B3SHH9 223 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 INMT-MINDY4F8WBC2 141 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 ATP5HO75947 161 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 IFNA6P05013 189 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 CAPZBP47756 277 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 TCL1AP56279 114 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 AP3S2P59780 193 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 CCL7P80098 99 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 IFITM2Q01629 132 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 PMAIP1Q13794 54 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 C8orf74Q6P047 294 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 ALKAL1Q6UXT8 129 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 Q6ZS49 121 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 C11orf40Q8WZ69 217 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 PPP1R14BQ96C90 147 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 CCDC94Q9BW85 323 aaPredicted RBP1.25□□□□□ -2.21
SQLE-202ENST00000518604 YIPF3Q9GZM5 350 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 OR51V1Q9H2C8 321 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 BAIAP2Q9UQB8 552 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 SLC22A13Q9Y226 551 aa1.25□□□□□ -2.21
SQLE-202ENST00000518604 KIF24Q5T7B8 1368 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 UNC13AQ9UPW8 1703 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 FLG2Q5D862 2391 aaPredicted RBP1.24□□□□□ -2.21
SQLE-202ENST00000518604 TGIF2-C20orf24A0A0A6YYL0 155 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 KPNA3O00505 521 aaPredicted RBP1.24□□□□□ -2.21
SQLE-202ENST00000518604 IFNA16P05015 189 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 HSD11B1P28845 292 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 PPP1R2P41236 205 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 AESQ08117 197 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 STX5Q13190 355 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 GUK1Q16774 197 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 PPP1R2P3Q6NXS1 205 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 LRRC25Q8N386 305 aaPredicted RBP1.24□□□□□ -2.21
SQLE-202ENST00000518604 MRPL30Q8TCC3 161 aaKnown RBP1.24□□□□□ -2.21
SQLE-202ENST00000518604 SLC35B4Q969S0 331 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 OR52E6Q96RD3 313 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 WDR61Q9GZS3 305 aaKnown RBP1.24□□□□□ -2.21
SQLE-202ENST00000518604 CAMSAP1Q5T5Y3 1602 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 PTPRBP23467 1997 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 GLI3P10071 1580 aa1.24□□□□□ -2.21
SQLE-202ENST00000518604 IGKV1D-43A0A0B4J1Z2 117 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 EEF1E1-BLOC1S5C9J1V9 151 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 M0R036 132 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 PMP2P02689 132 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 RPS4Y1P22090 263 aaKnown RBP1.23□□□□□ -2.21
SQLE-202ENST00000518604 ZNF345Q14585 488 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 CDK5R1Q15078 307 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 Q8N2B8 174 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 MCFD2Q8NI22 146 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 RASSF5Q8WWW0 418 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 CCDC42Q96M95 316 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 C9orf16Q9BUW7 83 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 TLNRD1Q9H1K6 362 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 CISHQ9NSE2 258 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 CCDC88CQ9P219 2028 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 CCDC144AA2RUR9 1427 aa1.23□□□□□ -2.21
SQLE-202ENST00000518604 HECW2Q9P2P5 1572 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 SMIM9A6NGZ8 99 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 CHP2O43745 196 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 FADS1O60427 444 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 RPP14O95059 124 aaKnown RBP1.22□□□□□ -2.21
SQLE-202ENST00000518604 CEBPGP53567 150 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
SQLE-202ENST00000518604 SUPT4H1P63272 117 aaKnown RBP1.22□□□□□ -2.21
SQLE-202ENST00000518604 SRSF6Q13247 344 aaKnown RBP1.22□□□□□ -2.21
SQLE-202ENST00000518604 RPL22L1Q6P5R6 122 aaKnown RBP1.22□□□□□ -2.21
SQLE-202ENST00000518604 OR5B17Q8NGF7 314 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 IMP4Q96G21 291 aaKnown RBP1.22□□□□□ -2.21
SQLE-202ENST00000518604 DERL1Q9BUN8 251 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 BRWD1Q9NSI6 2320 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 SETD5Q9C0A6 1442 aa1.22□□□□□ -2.21
SQLE-202ENST00000518604 FUOMA2VDF0 154 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 SMIM23A6NLE4 172 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 PSMD12O00232 456 aaPredicted RBP1.21□□□□□ -2.22
SQLE-202ENST00000518604 OR5F1O95221 314 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HAND1O96004 215 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 CLPSP04118 112 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 CYBAP13498 195 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BOP23527 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BBP33778 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 EIF2B2P49770 351 aaKnown RBP1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BDP58876 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 PSME3P61289 254 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 HIST1H2BCP62807 126 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 REEP5Q00765 189 aa1.21□□□□□ -2.22
SQLE-202ENST00000518604 RUNX1Q01196 453 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms