RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 A0A0J9YWU9 116 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 NDUFA4O00483 81 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 TSPAN4O14817 238 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 CTSDP07339 412 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 CTSGP08311 255 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 LAMTOR1Q6IAA8 161 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 SPSB3Q6PJ21 355 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 TBC1D26Q86UD7 250 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 GPX8Q8TED1 209 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 SPAG8Q99932 426 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
CTNNA1-206ENST00000517980 SPRY2O43597 315 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 IGKV1-39P01597 117 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 IGKV1D-39P04432 117 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 DEFB135Q30KP9 77 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 OR5B3Q8NH48 314 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 SLC25A46Q96AG3 418 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 MISP3Q96FF7 219 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 TMEM14BQ9NUH8 114 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
CTNNA1-206ENST00000517980 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 A0A087WXM4 84 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 SMIM31A0A1B0GVY4 71 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 K7EMT4 169 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 YIF1AO95070 293 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 TFPI2P48307 235 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 NCS1P62166 190 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 ZNF124Q15973 351 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 IZUMO4Q1ZYL8 232 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 APRG1Q8IVJ8 170 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 CADM3Q8N126 398 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 OR4A16Q8NH70 328 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 SEC22AQ96IW7 307 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 SMPXQ9UHP9 88 aa12.82□□□□□ -0.36
CTNNA1-206ENST00000517980 IGHV3OR16-13A0A075B7E8 117 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 IGHV3-74A0A0B4J1X5 117 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 CXorf65A6NEN9 183 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 C15orf61A6NNL5 157 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 HPGDSO60760 199 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 ELK1P19419 428 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 APOC4P55056 127 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 VBP1P61758 197 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 SPINK9Q5DT21 86 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 H2BFWTQ7Z2G1 175 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 LYG2Q86SG7 212 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 RNF2Q99496 336 aa12.81□□□□□ -0.36
CTNNA1-206ENST00000517980 I3L2K1 104 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 M0QYG6 137 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 CHEK1O14757 476 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 MFAP4P55083 255 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 LPCAT3Q6P1A2 487 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 Q6ZWC4 215 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 STPG3Q8N7X2 389 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 OR1P1Q8NH06 330 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 MRGPRFQ96AM1 343 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 PINX1Q96BK5 328 aaKnown RBP12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 TSC22D3Q99576 134 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 RHPN1-AS1Q9BWJ2 59 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
CTNNA1-206ENST00000517980 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 C15orf62A8K5M9 175 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 NUPL2O15504 423 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 LY6G6CO95867 125 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 MT-CO2P00403 227 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 APOA1P02647 267 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 PI3P19957 117 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 S100GP29377 79 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 BMI1P35226 326 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 TMEM116Q8NCL8 245 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 FUNDC2Q9BWH2 189 aa12.79□□□□□ -0.36
CTNNA1-206ENST00000517980 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 UBE2CO00762 179 aa12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 FCGR2BP31994 310 aaPredicted RBP12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 UCP3P55916 312 aa12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 HSPE1P61604 102 aaKnown RBP12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 RNF183Q96D59 192 aa12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
CTNNA1-206ENST00000517980 PGAM2P15259 253 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 RCVRNP35243 200 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 ERHP84090 104 aaKnown RBP12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 RELQ04864 619 aaPredicted RBP12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 TNFRSF9Q07011 255 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 GALNT14Q96FL9 552 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 MAP6D1Q9H9H5 199 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 FAM212BQ9NTI7 297 aaPredicted RBP12.77□□□□□ -0.37
CTNNA1-206ENST00000517980 KLK11Q9UBX7 282 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms